Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1404 |
Symbol | |
ID | 3569089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1534107 |
End bp | 1536074 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637679872 |
Product | cytochrome c family protein |
Protein accession | YP_284623 |
Protein GI | 71907036 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.352447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0404574 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCC AGAAATTCTT CGGGGTATTG GCACTAGCCA GTGCTTCATT TCTTGCCAGT CATGGCGCAA CGGCGGCAGA TGCGGTACCC AAGCTCGACA ATGCATCGTG TCTGACCTGT CACGAAACCG GCAAGCACAA GATCGAAGTT GCTGCCGGTG ATGAAAAGCG TGCCTTGGCC CCCGTCAATC CAGGCAAGTT GGCCAAGAGT GTCCATAGCA CAATGGAATG TGTGGCTTGC CACACGGACA TCGTCGATGC CAAGGAAAAG CATGAAAAGG CGGCCAACGT GGCGCAGCCG GATTGTGCAA CCTGCCATAC GAAGCTGTGG GATCAGGCAA AAGCCAATCC GGCCGGCAAG GAGCGTTTGG GCGTCGTCGC TCAGAACGTC GATGCTTACA AGGCTTCGTT CCATGCCCGT CCAGATGCGG ACAATCCGGA TCGTCCGAAA GCGACCTGCG GTGATTGCCA TGCAACACAC GATTTTGCCG TACCCAAGAA AGGTACGCCG GAGCGCGATG CCTGGCGTCT GACGATCCCC AAGACCTGCG GTGAAAAGTG CCACGACGAG CAGCTTGAGG ACTACGAAGG CTCTGTCCAT GGCAAATTGA CCATGGGCAA GGATGATCCC AAGGGGGCCG TGTGTATCGA CTGCCATACC AGCCATGACA TCAAGGGAGC ATCGTCTGAC CCGTTCAAGC TGAAGAACGT CGAGGCTTGT GGCGATTGTC ACAAGGAAGA ACTGCATAGC TATCGCGACA CTTATCACGG GCAGGTGAAC AAACTCGGCT ATACCTACAC GGCCAAGTGT TCGAATTGCC ACGGCAGCCA CGGCATTGCC AAAGTGGATG ATCCGGCCTC CAAGGTCCAT ATCAAGAATC GCCTGAAGAC CTGCCAGGAG TGTCACAACG AGAAGAAGGG CATGCCACTG GCGACCGAGG GTTTCATCTC GTTTGGCCCG CACGCCAATG GTCACGATTT CGACAAATAT CCGCAGATGT GGATAGCCAC GAAATTCATG GTTGCCCTGC TGATCGGCGT CTTCGCCTTC TTCTGGTTGC ATTGTGGCCT GTGGTACTAC CGCGAATGGC AAGAGCGCAA GGCGCACAAG ACCATGTCTC GCGTTTCTAC CGAGGCCTTG GGCTTGGCCA AGCCGGAGAA GCACTTCCAG CGCTTTGCCC TGGGGTGGCG CGTCGCTCAC CTGGTATTTG CGCTGGTGAC GATGACCCTT GTTCTGACCG GTACCTCGGC GCTGTTCTCG AGTAGCAGCT GGGCGCCGCT GGTGGCGGCG GCGGTTGGTG GGCCCAAGAT GCTCGGCATC ATTCACCGGG TAGCTGCGGC GTTGTTTGTC GGCATCTTCA TGATCCACTT CGTCTACGTC ATGCAGCGCC TGTTGCGTAG CAGGACTTTC CGTTGGTTCG GGCCGGATTC ACTGATTCCG AACTGGAAGG ACTTTGCCGA TTGCTGGGGC ATGTTCAAGT GGTTCTTCGG CCGCGGACCC AAGCCGCAGT TCGAACGCTG GACCTACTTC GAGAAGTTCG ATTACTGGGC AGTGTTCTGG GGTGTCAATA TCATCGGGTG GAGCGGCCTG ATGCTGGCCT TCCCGCATGT GACGGCCAAG TTCCTGCCGG GCTGGGTCTT CAATGTGGCG ACGCTGGTGC ATGGCGAAGA GGCCTTCCTC GCAGCGGTCT TCCTCTTCAC GGTGCATTTC TTCAACAACC ACTTCCGTCC GGATAAACTG CCGCCGCCGG ATGTGGTGAT GTTCACCGGT ACGCAGTCGA TCGAGGAGTT CCGCAAGGAC CATCCGGCGC ATTACCAGCG CCTGGTCGAC ACCGGAGAGC TGGAGAAGTA TCTGGTGGAT GCGCCGTCAC AGCAGATGCA CACGGGATCG GTTATTCTTG GTCTAACGCT GATTACCGTT GGCCTGGGAT TGCTGGCTTT GGTCGGAACA GGTTTCTTCA GTCACTGA
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Protein sequence | MNFQKFFGVL ALASASFLAS HGATAADAVP KLDNASCLTC HETGKHKIEV AAGDEKRALA PVNPGKLAKS VHSTMECVAC HTDIVDAKEK HEKAANVAQP DCATCHTKLW DQAKANPAGK ERLGVVAQNV DAYKASFHAR PDADNPDRPK ATCGDCHATH DFAVPKKGTP ERDAWRLTIP KTCGEKCHDE QLEDYEGSVH GKLTMGKDDP KGAVCIDCHT SHDIKGASSD PFKLKNVEAC GDCHKEELHS YRDTYHGQVN KLGYTYTAKC SNCHGSHGIA KVDDPASKVH IKNRLKTCQE CHNEKKGMPL ATEGFISFGP HANGHDFDKY PQMWIATKFM VALLIGVFAF FWLHCGLWYY REWQERKAHK TMSRVSTEAL GLAKPEKHFQ RFALGWRVAH LVFALVTMTL VLTGTSALFS SSSWAPLVAA AVGGPKMLGI IHRVAAALFV GIFMIHFVYV MQRLLRSRTF RWFGPDSLIP NWKDFADCWG MFKWFFGRGP KPQFERWTYF EKFDYWAVFW GVNIIGWSGL MLAFPHVTAK FLPGWVFNVA TLVHGEEAFL AAVFLFTVHF FNNHFRPDKL PPPDVVMFTG TQSIEEFRKD HPAHYQRLVD TGELEKYLVD APSQQMHTGS VILGLTLITV GLGLLALVGT GFFSH
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