| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1399 |
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| Symbol | |
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| ID | 3566127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1527460 |
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| End bp | 1529511 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637679867 |
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| Product | PAS |
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| Protein accession | YP_284618 |
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| Protein GI | 71907031 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.04458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGAGA TTGCTCAAAC AGTCAGGAGA CTGATCCAGA GCCCATCGGT TCGGGCTGTG
TTGATGCTGT CAGTTTCAAT GGTGATGGCA GTGGTTGTCG GCACGCTAGC GCTGCTCGTT
GATTTGCGGC AACAGGAGTT GACGCATGCA CGAGGCGAAA CGATCAGTCT GAACCGGATT
CTGGCTGAAC AAACCACTCG AACGATCGAT GGTGTGGCGT TGGCCATGTA TGGTGCCCGC
GACCGCATAT CCGACAAGGT TGGGCGAGAC CTTGCATTGG ATAGCACGCC CGTTCATCTG
CTGCTGCAAT CTCGGATTAT CGGCCTGCCG CAAGTGAAAT CGATGTTTGT CGCCGATAGC
AAAGGCATGG TGGTCAATTC GTCAAGGGAT GATCTGGCCT CGCCGTTCAG CGTTGCGCAG
CGAGAATTTT TTCAATACTT CAGTACGTCG AATCAGGATG GCCTGTTTGT GTCGCTCCCC
GAACGGGCTC GAATCGATGG TCAATGGACC TTTTACCTGG CTGTTCGATT GTTGAATTCG
GATGGCAGCT TTCGGGGGGT CATCGCTTCC GCCATCAGCA TTGAATACTT TGAGTCGCTC
TATGACAGCA TCAATCTGGA TTTTGTCAGC AAAATTCAAT TGCTGAGTCG ACATGGGGAA
CTGATGGCAG GGCATCGCAC GGGGGATAGC GCACTTGGTG AGCGAGTGCT TGAACCAGAT
TCACTATCCA GAATTGCGGG GCATCCTGAA AATGAGGTCG TGCTTTCCAA TCATGATGCA
ATGATGGAGC CCTGGATTTC AACGTATCGT CAGGTGGCGA AATACCCCTT GATTGTTTCG
GCCGCCGTTA GCGAACACGA AGCGCTTACG CCATGGCGCA GAGTTGCCCT ACCTATAGCA
ACCGGTGCCG TAGCGGTGAT CGTATTCATC TTGTTGGCAA CGACCATCAT TCTTAAAAAT
CTGCTGAGGA AAGAGCACCT TCAACTTGAG CGCGATGCCA GTAACGAAAA ACTCAGGCAC
ATGGTGCAGT CGGTCAGGGA TGCGATTCTC ACGGTCGACT CCTCCCAAAA CATAGTCTTG
TTCAATTCGG CAGCAGAGCA GCTTTGGGGG ATACGAGCCG CCGATGTTCT TGACCAGAAT
ATCGAACAGT TTTTACTGCG CTCCCAGCCA AAAATTGTTG CTTCAAATCT GCTGGGCTAT
CTGCGCGAGG CTTGGCAATC TCCTTCTGAT CTGGCGCTAC TGGGCATTGT TTCGTTAGTG
AGAGACGATC AGGATATCCC CGTGGAACTA AGCCTTTCCA GTACAACGGT GCGAGGGGAA
AGGCTGGTGA CCGCAATTTT TCGCGATCTA TCGGAACGCC AGCGTACCGA GTTGGAACTG
CTCAAATCCA ATCGTCAGTT GCAAGAACTC ACCGCCTCGT TGGAAAGCGT CCGGGAGCAG
GAGAGGTTGC GCATTTCACG AGAGTTGCAT GATGAATTGG GGCAAGCGTT GACTGGACTC
CGCATGGAGA TTTCCTGGCT GGGGGGGCGT CTTCTCACGA CGCAACCCGA GTTGGAACAG
AAAGTTGTTT CAATCAAAAA GCTGATTGAT GGGACCATTA AGTCGGTCCG TCGAATTTCT
TCGGAGCTCA GACCTCTGGT TCTTGATGAC CTGGGATTTG CTGCGGCCGC CAACTGGTAT
GTCGACCAAT TTGCGACACG AACCAATTTG AAGGTCACAC TCGAGTTGCC GAACGACGAC
CCGGAAAACG GTGGAACGGT GGCGACGACG CTGTTCAGGG TGCTGCAAGA GTCGCTGACC
AACGTCGCTC GCCATGCCGG AGCACGGAAC GTCGATATTC GGCTGCTGCA AGCAAACGAT
CAGTGGCGAC TGGAAATTCG GGACGATGGT CAGGGATTTG ACCAGTCATC AGCAAAAATG
GGTGGCATCG GATTAATCGG AATGCGAGAG AGGGTTCAGG CCCTGGGCGG AAGCTTCGAA
CTGACGGCGG CGCCGGGTCA AGGTACGCTA ATCGAAATTT GCATTCCCGT AGAAAGCGCA
CGAAAGGGCT GA
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| Protein sequence | MIEIAQTVRR LIQSPSVRAV LMLSVSMVMA VVVGTLALLV DLRQQELTHA RGETISLNRI
LAEQTTRTID GVALAMYGAR DRISDKVGRD LALDSTPVHL LLQSRIIGLP QVKSMFVADS
KGMVVNSSRD DLASPFSVAQ REFFQYFSTS NQDGLFVSLP ERARIDGQWT FYLAVRLLNS
DGSFRGVIAS AISIEYFESL YDSINLDFVS KIQLLSRHGE LMAGHRTGDS ALGERVLEPD
SLSRIAGHPE NEVVLSNHDA MMEPWISTYR QVAKYPLIVS AAVSEHEALT PWRRVALPIA
TGAVAVIVFI LLATTIILKN LLRKEHLQLE RDASNEKLRH MVQSVRDAIL TVDSSQNIVL
FNSAAEQLWG IRAADVLDQN IEQFLLRSQP KIVASNLLGY LREAWQSPSD LALLGIVSLV
RDDQDIPVEL SLSSTTVRGE RLVTAIFRDL SERQRTELEL LKSNRQLQEL TASLESVREQ
ERLRISRELH DELGQALTGL RMEISWLGGR LLTTQPELEQ KVVSIKKLID GTIKSVRRIS
SELRPLVLDD LGFAAAANWY VDQFATRTNL KVTLELPNDD PENGGTVATT LFRVLQESLT
NVARHAGARN VDIRLLQAND QWRLEIRDDG QGFDQSSAKM GGIGLIGMRE RVQALGGSFE
LTAAPGQGTL IEICIPVESA RKG
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