Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1392 |
Symbol | |
ID | 3566120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1521871 |
End bp | 1522782 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637679860 |
Product | LysR family transcriptional regulator |
Protein accession | YP_284611 |
Protein GI | 71907024 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0000534606 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.185395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCAC TCATGAGTCT TGATGCCAAC GATCTGATTC TTTTCGCCCA GGTGATGGCG GCCGGGAGTT TTTCCCGGGC GGCCGAGCGC TGCGGTCTGC CGAAATCGAC GCTGTCCCGG CGCATTACTC AGCTTGAAAC CAAGCTCGGC GAGCGCCTGC TGACGCGCAG CACGCGCCGT CTGGCCATCA CAGAATTTGG CGAGCAGATT CTCGATCACG CCAAACGCCT ACTCGAGGAA ACCGAGGCCG CTTCGGCCAT GGCCCTGCAT CGGCAAGGCA CGCCGCGCGG TGTGCTGCGG GTTTCGCTGC CGCCCGATTT TGTCGAACTG GATCTGACGC CCTTGCTGCT CCAGTATGCG AGCAGTTATC CGGAGGTTCG CCTTGAGCTT GATCTGTCGC CACGTCGGGT CGATCTGCTG GCTGAGCGTT TTGACCTCGC CGTACGGGCC GCCAGTCGCT TGCCCGATGA CACTACCCTG GTCGCCAGAA AGCTCTGCGA AATGCAAAAC GGGCTTTATG CCAGTCCGGC CTATCTGGCC CGCTATGGCA CGCCGGCCAA GCCGGCTGAT CTGCTCGATC ATGTCTGCCT CGGGATGATC AGCGGCACCG GCGAGGCCTT GCCCTGGCAG CTCTCGTGTG GCGGGGATCA ATGGGAGGGG ATGCCGAACG GTCCTCTGGC GGCAAACTCG CGCAGCCTGC AGCGTGATCT GGCGGCACAC GGACTGGGTA TCGTCGGGCT GGCCGAGCGT TTCGCTACCC AGTGGATTGA GCAGGGCTTG CTGAAGCGGG TGCTGCCGGA GTGGCGCTTG CCGACAGTGA CGATCTGGTG CGTGACACCG GGCCGGCGCC TGCTGCCGCT GCGAACCACC GCCTTCATGG ACATGCTGCG GGCAGCATTG GGAACTGATT GA
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Protein sequence | MSALMSLDAN DLILFAQVMA AGSFSRAAER CGLPKSTLSR RITQLETKLG ERLLTRSTRR LAITEFGEQI LDHAKRLLEE TEAASAMALH RQGTPRGVLR VSLPPDFVEL DLTPLLLQYA SSYPEVRLEL DLSPRRVDLL AERFDLAVRA ASRLPDDTTL VARKLCEMQN GLYASPAYLA RYGTPAKPAD LLDHVCLGMI SGTGEALPWQ LSCGGDQWEG MPNGPLAANS RSLQRDLAAH GLGIVGLAER FATQWIEQGL LKRVLPEWRL PTVTIWCVTP GRRLLPLRTT AFMDMLRAAL GTD
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