Gene Daro_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1392 
Symbol 
ID3566120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1521871 
End bp1522782 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID637679860 
ProductLysR family transcriptional regulator 
Protein accessionYP_284611 
Protein GI71907024 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.0000534606 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.185395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAC TCATGAGTCT TGATGCCAAC GATCTGATTC TTTTCGCCCA GGTGATGGCG 
GCCGGGAGTT TTTCCCGGGC GGCCGAGCGC TGCGGTCTGC CGAAATCGAC GCTGTCCCGG
CGCATTACTC AGCTTGAAAC CAAGCTCGGC GAGCGCCTGC TGACGCGCAG CACGCGCCGT
CTGGCCATCA CAGAATTTGG CGAGCAGATT CTCGATCACG CCAAACGCCT ACTCGAGGAA
ACCGAGGCCG CTTCGGCCAT GGCCCTGCAT CGGCAAGGCA CGCCGCGCGG TGTGCTGCGG
GTTTCGCTGC CGCCCGATTT TGTCGAACTG GATCTGACGC CCTTGCTGCT CCAGTATGCG
AGCAGTTATC CGGAGGTTCG CCTTGAGCTT GATCTGTCGC CACGTCGGGT CGATCTGCTG
GCTGAGCGTT TTGACCTCGC CGTACGGGCC GCCAGTCGCT TGCCCGATGA CACTACCCTG
GTCGCCAGAA AGCTCTGCGA AATGCAAAAC GGGCTTTATG CCAGTCCGGC CTATCTGGCC
CGCTATGGCA CGCCGGCCAA GCCGGCTGAT CTGCTCGATC ATGTCTGCCT CGGGATGATC
AGCGGCACCG GCGAGGCCTT GCCCTGGCAG CTCTCGTGTG GCGGGGATCA ATGGGAGGGG
ATGCCGAACG GTCCTCTGGC GGCAAACTCG CGCAGCCTGC AGCGTGATCT GGCGGCACAC
GGACTGGGTA TCGTCGGGCT GGCCGAGCGT TTCGCTACCC AGTGGATTGA GCAGGGCTTG
CTGAAGCGGG TGCTGCCGGA GTGGCGCTTG CCGACAGTGA CGATCTGGTG CGTGACACCG
GGCCGGCGCC TGCTGCCGCT GCGAACCACC GCCTTCATGG ACATGCTGCG GGCAGCATTG
GGAACTGATT GA
 
Protein sequence
MSALMSLDAN DLILFAQVMA AGSFSRAAER CGLPKSTLSR RITQLETKLG ERLLTRSTRR 
LAITEFGEQI LDHAKRLLEE TEAASAMALH RQGTPRGVLR VSLPPDFVEL DLTPLLLQYA
SSYPEVRLEL DLSPRRVDLL AERFDLAVRA ASRLPDDTTL VARKLCEMQN GLYASPAYLA
RYGTPAKPAD LLDHVCLGMI SGTGEALPWQ LSCGGDQWEG MPNGPLAANS RSLQRDLAAH
GLGIVGLAER FATQWIEQGL LKRVLPEWRL PTVTIWCVTP GRRLLPLRTT AFMDMLRAAL
GTD