Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1367 |
Symbol | |
ID | 3569148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1489741 |
End bp | 1490568 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637679835 |
Product | regulatory protein, LuxR |
Protein accession | YP_284586 |
Protein GI | 71906999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00210507 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGGGAACG CGGGGGGACG GACAATTGAT CAGCGGATCA GCAAGCTAAC GTCCGCGTCG GATGGACACG GAGACGTTCT AGAGGGTTGG GCACAACGTC CTACTTGCCG GGGTATTCGT CCGCGATGTG GCCAAACAGG CGATGAAGAG TCGGTTTGTG CGGACTGTCA GTTCCTGCAT GAGCGGCAGC TTGGAACTGC GGAAGACGTG GAATTCTTAC GTCATTGCCG CGCTATCCGG GGCTATGTCG ATCAAGGTAT CAGCGCCCTC TTCTCACCTT ATGTCGCGGC AGTTCTGGTT GGAGCAAACG GGCGCGTTCT GGATATTGAT GAGCGCTCCG CCGAATACCT GCGTACATCC CGTGTTCTAG GTATACGGCA CAACCGGTTA TATGCGCAGG AAAAGGACGT CAATGACCAC CTGATGCAGG CCATCGACCG GGTTTCGGCT GGCGGCAAGC CGGATACCCT TATCTGTTCA GTTGGCAGGA ATTCTGCCGC ACGATATGCG ATTTTGTTGC AACCGAATCC TCACAACTCT TCGGCCATGC CAAGCGAGAC TCACCCGGTT GTTTGTTTTA TCTTCCCGCT GGGGCGTCGG CGGGTTGCCA GTGCCCAACA ATTGATTTCT CTGTTTGGCC TCTCGCCTGC AGAGGCTCGA TTGGCTCGGG CTTTATGCCA TGGAGAGACA CTGGAGGAGT TCGCGGAAGC ACAGAACGTT AAGCTTTCTA CCGTCAAGAC TCAATTACGG GCCGTTTTCG CCAAGACTCA AACTGATCGG CAAGTTGCAC TGGTTAACCT GATAGCAGGT ATTCCACCTT TACGGTAA
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Protein sequence | MGNAGGRTID QRISKLTSAS DGHGDVLEGW AQRPTCRGIR PRCGQTGDEE SVCADCQFLH ERQLGTAEDV EFLRHCRAIR GYVDQGISAL FSPYVAAVLV GANGRVLDID ERSAEYLRTS RVLGIRHNRL YAQEKDVNDH LMQAIDRVSA GGKPDTLICS VGRNSAARYA ILLQPNPHNS SAMPSETHPV VCFIFPLGRR RVASAQQLIS LFGLSPAEAR LARALCHGET LEEFAEAQNV KLSTVKTQLR AVFAKTQTDR QVALVNLIAG IPPLR
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