Gene Daro_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1360 
Symbol 
ID3569250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1479748 
End bp1481148 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content56% 
IMG OID637679828 
Productamidase 
Protein accessionYP_284579 
Protein GI71906992 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.000267228 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000102639 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGTAT CTGAATTGCA CTATTTGGAA ATGACAGAGC TTGCACGATG TATGCGTAAA 
CGCGAGCTAT CTCCAGTCGA AGTAACAGCA GCTACCTTGG CTCGTATCGA GGCGCTTGAC
CCCAAGTTGC ATGCCTATGC GACGGTGCTT CCTGAATATG CCATGGCTCA GGCTCGGGAA
GCCGAGCGCA GCATCATGGC AGGTGAGGAT GTTGGCCCTC TATGTGGAGT GCCAATCGGG
GTCAAGGATT TGTGCTGGGT CGCCAACTAT CCGACCGCAG CTGGGACTAC TGTTCACCGG
GGTTTTGTTC CGGGAGAGGA TGCAACCGTC GTCAAACGTT TGCGAGCTGC CGGTGCCATC
ATCCTGGGTA AGCTGCAGTT GACCGAAGGT GCCTTCGCCA CCCACCATCC GACCATACCA
GTTCCTTTGA ATCCGTGGGG CGAGGCGCAC TGGTCGGGGG CTTCTTCAAG TGGGTCCGGT
GTGGCTACTG CAGCAGGGCT ATGCTACGCG GCAATCGGTA CGGATACAGG AGGATCGATT
CGCTTCCCTT CGGCAGCGAA CGGACTTACG GGTATCAAGC CGACTTGGGG AAGAGTGAGC
AGGTACGGGG TATTCGAATT GGCGGCCAGC ATGGATCATG TCGGTTCGAT GGCCCGCTCA
GCGGCTGATG CGGCTTTGCT GCTGGGCGTG ATGGCCGGTC ATGATCCGCT GGATCCGACT
TCATTGCCGG ATGAAGGTCT GACCCTGCCA CATGAAGCAC AGGATTTGCG TGGGCTCAGG
GTCGGTATTG ATCGCGCCTG GAATGCCTTG GGCACTGAGC CGGTAATAAC TCAGGCGATT
GATCGGGCGA TCAATGTTAT TGCTGGCTTG GGCGCCCGGT TCATTGATGT CGCTTTCCCG
GATGCAAGGG CCGTGGTCGA TGAGTGGGAA ACTAATTGCG GCGTGGAAGT TGCGGTTGCG
CACGCCAATA CATTCCCCAA ATTTACGGCT GAGTATGGTC CGGCATTGTC TCGGTTGATC
GAACTTGGTC GGGCGACGGA TGCTATGGAT TATCAACGTG TGCTGCTTAA TCGCGCTGAA
TTCACAGGCC GCTTAAATAA ATTGATGCAG AGCGTCGACT TGTTGATCTT ACCGGTCCAG
CCCTATGCGG CGCCGACCTA TGAACAACTG GGTGCCCTGG CAGACGACCC AGAGGCCAAT
AGTCGCCTGA TTCAGTTCAC TGCACCGATC AACTCCAGCG GACATCCTGC AATTACGCTA
CCTTGCGGAT TTACTGAGCA GGGGTTGCCG TTGGCTTTCC AGTTCATTGC ACGGCATGGT
GACGAAGCTG TGTTGTGCCG GGCGGGGTTG GCTTTTCAGT CGGCGACTGA CTGGCATAGG
TGGCACCCAG AGATTGCTTG A
 
Protein sequence
MSVSELHYLE MTELARCMRK RELSPVEVTA ATLARIEALD PKLHAYATVL PEYAMAQARE 
AERSIMAGED VGPLCGVPIG VKDLCWVANY PTAAGTTVHR GFVPGEDATV VKRLRAAGAI
ILGKLQLTEG AFATHHPTIP VPLNPWGEAH WSGASSSGSG VATAAGLCYA AIGTDTGGSI
RFPSAANGLT GIKPTWGRVS RYGVFELAAS MDHVGSMARS AADAALLLGV MAGHDPLDPT
SLPDEGLTLP HEAQDLRGLR VGIDRAWNAL GTEPVITQAI DRAINVIAGL GARFIDVAFP
DARAVVDEWE TNCGVEVAVA HANTFPKFTA EYGPALSRLI ELGRATDAMD YQRVLLNRAE
FTGRLNKLMQ SVDLLILPVQ PYAAPTYEQL GALADDPEAN SRLIQFTAPI NSSGHPAITL
PCGFTEQGLP LAFQFIARHG DEAVLCRAGL AFQSATDWHR WHPEIA