Gene Daro_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1358 
Symbol 
ID3569248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1477148 
End bp1478503 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content53% 
IMG OID637679826 
ProductRieske (2Fe-2S) region 
Protein accessionYP_284577 
Protein GI71906990 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.7533999999999998e-22 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000112258 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGACG ATTCCATTGT TCGCCGTCGT ACTTCCGCTT CCGGCCAGAA GGGTCCGAAT 
CGGGTCAATG ACGCAAAACT ACAAAGCCAA TACCAGCCTT ACAAAGACGC AGCCTGGGGC
TTTATCAACC ATTGGTATCC CGCGCTTTTT AGTAAAGAGT TGCCGGAGGA CACTGTTGAA
GGCATCCAGA TTTGCGGGAT TCCAATTGTT CTGCGCCGCT CAGGCGGCAA GGTCTATGCG
CTGAAGGATC AATGTCTGCA TCGTGGTGTT CGCCTGTCGG CCAAGCCGAT GTGCCTGACC
GAGGACACCA TCACCTGCTG GTACCATGGT TTTACCTTCA ATCTTGATGA TGGCAAGTTG
TCGACCATCG TTGCCAATCC GGATGATCAA CTCATCGGTA CTACGGGGAT CACGACTTAC
CCGGTCGAAG AGGTTGCCGG CATGATCTTC GTCTTTGTTC GCGAAGATGA TTATCCGGAA
GCAGACGTCC CGCCGCTGGC CCACGACCTG CCGATTCGTT TCCCGGAAAA TAACGAACGC
TTCCCGCACC CGCTGTGGCC TGATACCCCG AGCATTCTCG ACAAGAATGC AGTTGTGCAC
GGCATGCACC GGACAGGTTT TGCAAATTGG CGGATTGCCT GCGAAAACGG CTTCGACAAC
GCGCATATCC TGGTACATAA GGACAACGCG ATCGTCCACG CCAAGGATTG GGTTCTGCCA
CTAGGGATCA TTCCGACCTC CGACGATTGT ATTGAGTTGG TCGAAAACGA TGACGGCCCC
AAGGGCATGA TGCAGTGGAT GTTTACCGAC AAGTGGAAGC CCATTCTCGA AAACAAGCGT
CTCGACATGA AAGTCGAGAA CATCAACGGG CGCTTCTACC GCACCTCAGT CTTCCTGCCT
GGTGTCCTGA TGGTTGAAAA CTGGCCAGAA GAACATTTCG TTCAGTACGA GTTCTATGTG
CCAATCACCG ACGACACCTA TGAATATTGG GAAGTGATAG TCAAAGTGTG CGATACCGAT
AAGGACCGGA AGGCCTTTGA TTATCGATTT GAGCATCTGT TCAAGCCTCT TTGCTTGCAC
GGCTTTAACG ATTGCGATTT GCATGCCCGT GAAGCCATGC AGGACTTTTA CGGAGATGGA
ACGGGCTGGG ATGAAGAACA GCTGGTGTCC ACCGATGTTT CGCCGATTAC CTGGCGAAAG
CTGGCCTCGC GTTGGAATCG TGGTATTGCC AAGCCGGGGC GCGGCGTTGA TGGTTCGATC
AAGGCGAGCA GCATCCGCTT CAAAAAGTTG GCGCAAGGTA AGGAACCATC CTATTTCGTC
GACAAGATCG AGGATATCAA CACGTTCAAA GGCTAA
 
Protein sequence
MSDDSIVRRR TSASGQKGPN RVNDAKLQSQ YQPYKDAAWG FINHWYPALF SKELPEDTVE 
GIQICGIPIV LRRSGGKVYA LKDQCLHRGV RLSAKPMCLT EDTITCWYHG FTFNLDDGKL
STIVANPDDQ LIGTTGITTY PVEEVAGMIF VFVREDDYPE ADVPPLAHDL PIRFPENNER
FPHPLWPDTP SILDKNAVVH GMHRTGFANW RIACENGFDN AHILVHKDNA IVHAKDWVLP
LGIIPTSDDC IELVENDDGP KGMMQWMFTD KWKPILENKR LDMKVENING RFYRTSVFLP
GVLMVENWPE EHFVQYEFYV PITDDTYEYW EVIVKVCDTD KDRKAFDYRF EHLFKPLCLH
GFNDCDLHAR EAMQDFYGDG TGWDEEQLVS TDVSPITWRK LASRWNRGIA KPGRGVDGSI
KASSIRFKKL AQGKEPSYFV DKIEDINTFK G