Gene Daro_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1352 
Symbol 
ID3569242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1471035 
End bp1472288 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content51% 
IMG OID637679820 
Producthypothetical protein 
Protein accessionYP_284571 
Protein GI71906984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.00000699825 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000016423 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAATGA AAAAAGCAAT TTTTGCCACG CTCACAGTAT TTGGCGCTGC AGCTGCACTA 
GCCGCCGAGT TACCAGAAGG GACGGTCATT TCTGCCGAGA ATCTCGACAA GGTAAAGAAT
GACACTTTCG AAGGTCACAG CATTGCCAGC ATGCTCACTG AGCGTATGGA GTGGCGTATT
CGTAACAACG GCTGGAAATT ACCGTTGGCA AAGTCGAAGG AAATACCACT GGATCCTAAA
TGGGTAAAAG CATCACAGGC AAATGCCGGC AAGACAAAAA TTAACAAAGA GAGCTGTCAG
ATTGATGGAT GGGGAGGTGG CCAGCCCTTC CCGGATGTTG ACGTCAAGGA TCCGCAGGCG
GCCGAGAAGG TTATGTGGAA CTGGCATTTG GGGCAATTGA CCGCCGATCT TTCTCACGTG
CCATTCTGGA CTCAGGTTTT GATTGATGGG GCAAAGGGTG TGCATGCGGA GCCAACGGCA
GAATTTACCC GCTATGCAAT GAAGGGCCGC TTGACGGGTG CTTCAGTGGA GGGTGATGGC
ACCGAGCGTG GGCGTCAATT GCTTTACTTT AAATCACCAT CAGACATGAA AGGCTTGGGC
ACATTTACCG TGTTCTATGA CTCCGCCAAG GTCAATGATG TCTGGGCCTA CATCCCCGCT
GTGCGTAGGG TTCGCCGCTT GTCCGGCGGC GCCTGGATGG ATCCAGTTGG CTCTTCTGAT
CAACTTCAGG ATGACTTGGA GATTTTCAAT GCTCGCCCAT GTTGGTATCC GGGCTATAAG
TTGCTAGGCA AGCGTTGGGT GCTGGCAGTT GCCAACAGTA AGCACCCATT GTGGAATAAA
AATGGCAAGG ATTTTGCCGA AAAATACCCT GCGCTTGAGA ACAAGGCGCC GTTCTGGAAC
ATGAACAATG ACCGGTTCGA GCCACGCGAA GTCTATGTTA TCGAAGCAAC TACACCTTCG
GAACATCCAT ACAGCAAGAA GGTGGTGTAC GTCGATAGCA AGTACCCGCG TGTTTATTAC
GGCGAGGCCT ATAACCGGAA AGGCGAATTT TGGAAGTTTA TGGAGTGGCA CTCCTATCCT
GCCAAGGCCG ATGATGGCTT TGCCGATGTA CGTACCGCGG GTGGGGCAGT TATTGACTTC
CAGCGCAATC ACGGAACGGT CTTCCTTGTA GATACACCAA CTTGGAAGAG TAATACGCCA
GGGCGGACGG CTAACGATTT CTCGCTCCAG ACCCTCCAGT CTGCTGGTAA ATAA
 
Protein sequence
MSMKKAIFAT LTVFGAAAAL AAELPEGTVI SAENLDKVKN DTFEGHSIAS MLTERMEWRI 
RNNGWKLPLA KSKEIPLDPK WVKASQANAG KTKINKESCQ IDGWGGGQPF PDVDVKDPQA
AEKVMWNWHL GQLTADLSHV PFWTQVLIDG AKGVHAEPTA EFTRYAMKGR LTGASVEGDG
TERGRQLLYF KSPSDMKGLG TFTVFYDSAK VNDVWAYIPA VRRVRRLSGG AWMDPVGSSD
QLQDDLEIFN ARPCWYPGYK LLGKRWVLAV ANSKHPLWNK NGKDFAEKYP ALENKAPFWN
MNNDRFEPRE VYVIEATTPS EHPYSKKVVY VDSKYPRVYY GEAYNRKGEF WKFMEWHSYP
AKADDGFADV RTAGGAVIDF QRNHGTVFLV DTPTWKSNTP GRTANDFSLQ TLQSAGK