| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1351 |
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| Symbol | |
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| ID | 3569241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1469367 |
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| End bp | 1471016 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637679819 |
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| Product | transcriptional regulator LysR |
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| Protein accession | YP_284570 |
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| Protein GI | 71906983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0000706303 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000188076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCAAC AGAGGTCAGT GCGCGCTACA TCGCCTGGGC GTCTCACATA TCTGGCGCTT
GCCGTTACTC TCGTATCGCC GGTTCTTTGT GCAGCAGAGG AAGGGGGGGC TTTCGACAGT
TTCAAGGTTG ATGGTTACCT GCGCGAAGAA GTGTCGGTCA ATACAAAGAA CTGGGCGGAT
ACGCCGAACT ACAACGACCG AGGCAAGGTG TCGATGGCGC GCACAACGTT GCGCCTGAAC
GCTGACTGGA AAGCGACGGA CACCCTGTCC ATCGTGGCCA AATGGCGCGG CTCGCAGGAA
CTAAAGACAC CGTTCCTGAA GCATCTTGAA CAAATGGGGG CCAGCAACTA CACCTCTGGT
GGGGCTGGAA CCCAAGCTGA CATCATGGAT CTCTACAACA AGTCCGATTT CCGCGAGCTT
TATGTCGACT GGCAGGCCAC CGATCGCGTG AAATTCCGCT TCGGCCGGCA ACAGATCGTC
TGGGGCGAGA CCGATTTCTT CAACGCCAAC GACATGGTGC ATGGCTTCAA CTTGACCTGG
CGTTCTTTTC TTGAGCCGGC CAATGAAGAA CTGCGCAAGC CGTTGATCAT CTTGAAGACC
AACATCGATT TACCGGAAGC CAATGGAGCT ATCGAAGCTT TCGTTCGTCC GGGTTGGGAT
CGCAAAAAGG ATATCGGGAC CGAACTGGAC ATCTACGGCG GTCGCTGGTC CAGCCAGCCG
TACGCCGGCG TCGACTTCCG CAACATCGAC CCCTATAACC TGGACAACAA GGAAGGCGAT
TACAAGAAGG TTACCGGTGG TATTCGCTGG AACGGAACGA CTGATCATTT CAATTATTCG
CTGTCGTACC TGAAGACCTT CTGGCAAAAC CCCATTTTGA ATCCCAGTTC GACTGACTTT
GCTGGGGGGG CTTTCTATGT TCCGACCACG CAGGGCGCCT CGAATATCAA GCCTCAACAA
GGCGCCATCT TTGGCGAAAT CATCTATCCG CTCGTCGATG TCTTCGGCGC CACCGCTTCC
GGCTATGCCG ATTGGGCTGA TGCCGTGTTC AGCACCGAAG TCGCCTACAT CAAGGATGCG
CCTTATCAGT TCAACAATTT TCCGAACAAT TCACTGGCAT CGACGGTTGT GGCGCCTGGC
TTCGACGGGT TCAAAAAGAA AAACGTGATC GCCTGGATGT TGCGCATGGA TAAAAACATC
GCAGCCACCC AGAGCCTGCT CGGCTCAGAG AAGCCGATGT TCTTCTCGGT TCAGCTCTTC
GATAAGTGGA TTCAGGACTT CAACGAGAAC GAAGGCCTGC TGAATAGTGT TGGTTGGGGC
GCACGCACCA AGGAACACTC GTTTTTGCTG ACCGGTATTT TTAGCCTGAG CTACAACAAT
GGCCGCATCA AACCTGAACT GGTCGTTGGT ACAGATCTGA CCTACAAAGG TGGATTCTTC
GCACCGTCGG TCACCATGGA GCTATCCAAG AGTCTGAAGT GGAAAATCGA ATACGACGGC
TTTTGGGATG GTGGTCGTTG GCGTGATACC GGACCGGGCA GCCGGTGCGC CAGCCCCGGC
GCCAATCAGT CCAACTGCGA TAGCGCCGGT TTGTTTGGCT ATTTCCACAA CCGCGACCAG
CTGTACACCA GCCTGACTTA TCAGTTCTGA
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| Protein sequence | MNQQRSVRAT SPGRLTYLAL AVTLVSPVLC AAEEGGAFDS FKVDGYLREE VSVNTKNWAD
TPNYNDRGKV SMARTTLRLN ADWKATDTLS IVAKWRGSQE LKTPFLKHLE QMGASNYTSG
GAGTQADIMD LYNKSDFREL YVDWQATDRV KFRFGRQQIV WGETDFFNAN DMVHGFNLTW
RSFLEPANEE LRKPLIILKT NIDLPEANGA IEAFVRPGWD RKKDIGTELD IYGGRWSSQP
YAGVDFRNID PYNLDNKEGD YKKVTGGIRW NGTTDHFNYS LSYLKTFWQN PILNPSSTDF
AGGAFYVPTT QGASNIKPQQ GAIFGEIIYP LVDVFGATAS GYADWADAVF STEVAYIKDA
PYQFNNFPNN SLASTVVAPG FDGFKKKNVI AWMLRMDKNI AATQSLLGSE KPMFFSVQLF
DKWIQDFNEN EGLLNSVGWG ARTKEHSFLL TGIFSLSYNN GRIKPELVVG TDLTYKGGFF
APSVTMELSK SLKWKIEYDG FWDGGRWRDT GPGSRCASPG ANQSNCDSAG LFGYFHNRDQ
LYTSLTYQF
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