Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1350 |
Symbol | |
ID | 3569240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1466929 |
End bp | 1469301 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637679818 |
Product | RND efflux transporter |
Protein accession | YP_284569 |
Protein GI | 71906982 |
COG category | [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000000832069 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000222062 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATTGAAC GTATTGCCGA ATATTGCATT CGACAGCGCC GGATTGTGGT CGCCGCATTG GCGCTGCTGA CCGTGGTTTT GGGGTGGTTC GCGCTGCATA TCGAAGTCCG TACGGTGTTC GAGGACATGC TTCCGTCGCA ACACGAGTAC GTGAAGACTC ACCAGAAGTT CAAGGACACC TTTGGTGGCT CGAACATGGT GACAATCATG GTTGAGGTCA AAGAGGGGGA TATCTTTCAG TTGCCTGTCC TGGACAAGGT GCGGACGCTG ACCCTCGGGT TACGCGAAGT CTCCGCCGTT AATCCGTACC AAATCACCTC TCTCGCATCA AAGAAGTTGA AGGAGGTCCG AGCGTCGACC GAGGGTATCG AAACCAAGCC CCTAATGTGG CCGAATTTGC CGCAGGGACC GGATGACTTG GCTGAGTTGA AAGAGAAAGT GCTGCGGAAT CCGCTGGTGT ACGGGCAGTA CGTATCCAAA GATCTGCAGG CAACGCTGAT TACGGTTGAC TTCATCGACC GTGAGGTCGA CTACGGCAAG GTGTTTGGTG AAATTCGGGC CCTGGTCGGT AAGGTCGATG ATGGCTCCGT TCGTATTCGC GTCGTTGGCG ACCCTATCCT CTATGGCTGG GTCAACCACT ACGTGCCGGA AACTGTTGAT CTGGTGGCGG CTGCGTTGGC TGTCACAATG ATCATGCTAT TTGTCCTTCT TCGCACTTGG CGTGGCGTAC TTTTGCCTCT CTTGGCTGGT ATGGTCAGCG CAGTCTGGGC ATTGGGCATC TGCCGTCTGC TCGACATCCA TTTCGAGCCG CTGGTCATCG TTGTCGCCAT GCTTATTACG TCGCGGGCGG TGTCTCACTC GGTGCAGATC GTCAATCGTT TTGACGATGA GCTCGAAGTC ATCGAACCCA GTGCTGACTG CGCCCGTGTG GCAGCCAAGA TCGCATTGGC TGACCTTTTC CGTCCCGGCA TGTTGGGCAT CATTGCCGAT GCCGCGTGCA TGGCAGTGGT GGCTTTGAGC CCGATTCCGA TGTTGCAGAA GCTGACGGTC CTTTCGGTGG TTTGGGTCTC TACCCTGACG GTAAGCGCCG TGATTTTGAC CCCCGTACTT CTCTCCTATA TTCGGAAGCC GCATGGCATG GTCCATGGGA TCAATTTTAT GCCACCGGCC CGAAAGGTAC TTGATTTCGG CGTCTGGTTG GCAACCTCCA GATTTCGTTA CGTCAACATC GCCTGTAGCG TTGTAGTGAT GGTTATTTCA GGGATCTATG CTTTCAACCT GAAGATCGGC GATGCCAATC CGGGCTCGCC CATCCTCTGG CCGGAATCGA CCTACAACGT AGATTCGGCG GCAATCAACA CGCATTTCCA AGGCGTTGAT CGGATGTTTT TGGTCGTCGG GCAGGATGGC AAGGACGGCT TGCTCAAGAC CAATGAGGTG TTGCAGTCGA TGAACCGCTT CCAGCGTTTT ATCGAAGCTC AACCGGAGGT CGGTGGATCA GTCTCGATTG CCGACGTTCT GCCAGTGGTC AATGCGACCC TGCGCGAGGG AAATCCGCGC TACCTCGAGC TAGGGGCGAC GCAGGCAGTC AATGGCAGCT TGGTGGCAAT TCTCGACTCC GTTTCTGAAC CCGGCGATAT CGATCGCTTT GCCGACACTA AGTGGGCCAA CGGTGCCATC ACCATGATGT TCCGCGATCG TCAGGGGGAC ACCATCCAGA CTGCGGTGGC GAGAATCAAG GAATTTATCG CAGCAAATCC CCTACAGGAA GGCGAGTGGC AATTGGCTGG CGGTTTGATT GGTGTCATGG CAGCAGTCAA TGAGGTCATC CTTTCCAGCC AGATTGAAGC AATTGCCCTT GCGTTGTTTG TATTAGTCGT GATTTGCACC ATTGTGTATC GCTCGACCGT CGCCGGCATG CTGTTTATGG TCCCGGTAAT TATTTCGAAC ACGCTTACCT TCAGCTTCAT GGCGTGGAAG GGTATCGGTA TGAATATCAA TACCGTACCG GTCGCAGCTC TCGGCATCGG CCTCGGTGTC GACTACGCAT TTTATATAGC GGATCGCATC AAGGAAGAAA TAGCTGCCGG CAGTACGCCT GAACACGCGA TTCATGAAGC GCTGCATTCA GCAGGCATGG GCGTCATCGT CACGGCCAGC GTGCTGATCT GTTCGACGCT GCTGTGGTGG GTCTCATCGT TGAGATTCCA GGCCGAAATG GGCTTGTTGA TGGCGATCTG GCTCGGCATT TCGGCAGCTA GCGCGCTTTT CGTTATGCCT GCGCTGATTT ACGTCTTCCG TCCGGCCTTC ATTTTCGAAC CCAAGGGCGA GGCAGTGCTT GAGCATCTGC GTCCGATTTC AGCCAAAACC TGA
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Protein sequence | MIERIAEYCI RQRRIVVAAL ALLTVVLGWF ALHIEVRTVF EDMLPSQHEY VKTHQKFKDT FGGSNMVTIM VEVKEGDIFQ LPVLDKVRTL TLGLREVSAV NPYQITSLAS KKLKEVRAST EGIETKPLMW PNLPQGPDDL AELKEKVLRN PLVYGQYVSK DLQATLITVD FIDREVDYGK VFGEIRALVG KVDDGSVRIR VVGDPILYGW VNHYVPETVD LVAAALAVTM IMLFVLLRTW RGVLLPLLAG MVSAVWALGI CRLLDIHFEP LVIVVAMLIT SRAVSHSVQI VNRFDDELEV IEPSADCARV AAKIALADLF RPGMLGIIAD AACMAVVALS PIPMLQKLTV LSVVWVSTLT VSAVILTPVL LSYIRKPHGM VHGINFMPPA RKVLDFGVWL ATSRFRYVNI ACSVVVMVIS GIYAFNLKIG DANPGSPILW PESTYNVDSA AINTHFQGVD RMFLVVGQDG KDGLLKTNEV LQSMNRFQRF IEAQPEVGGS VSIADVLPVV NATLREGNPR YLELGATQAV NGSLVAILDS VSEPGDIDRF ADTKWANGAI TMMFRDRQGD TIQTAVARIK EFIAANPLQE GEWQLAGGLI GVMAAVNEVI LSSQIEAIAL ALFVLVVICT IVYRSTVAGM LFMVPVIISN TLTFSFMAWK GIGMNINTVP VAALGIGLGV DYAFYIADRI KEEIAAGSTP EHAIHEALHS AGMGVIVTAS VLICSTLLWW VSSLRFQAEM GLLMAIWLGI SAASALFVMP ALIYVFRPAF IFEPKGEAVL EHLRPISAKT
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