Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1339 |
Symbol | |
ID | 3569268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1457249 |
End bp | 1457884 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637679807 |
Product | nitroreductase |
Protein accession | YP_284558 |
Protein GI | 71906971 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000011432 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACCTGA TTCAAGCACT CAAATGGCGT TACGCAACAA AAAGAATGAA TCCGGCGAAG ACCGTGCCGG AGGAAAAGGT TGCTCGTATC GTTGAGGCAG CGCGCCTTGC ACCGACATCC AGTGGCCTAC AGCCCTTCGA AATCATCGTC ATCACGAATT CCGCGTTGCG CGAAAAAATC AAATCCGTTT CGATGGGGCA GCCCCAGGTT ACTGAGTGTT CTCATTTGCT GGTCTTTGCC GCCTGGGATG ATTACACCCC GGAGCGGATA AACAAAATGT ACGACTATGC TAATCAAGAG CGTGGTGGTT CAAACGAAGG GCTGGAGAAC TACCGGAATA TGTTGTTGAG CACGTATCCG CAGCGCGGTG CCGAGGTTAA TTTCCAGCAT GCGGCCAGGC AAGCCTATAT CGGGCTGGCT GCCGCATTGT TGGGTGCTGC CTTCGAAGAG GTTGATAGCA CGCCGATGGA AGGTTTCGAT CCCTCAGCGC TTGACGACAT TTTGGGCCTG CGATCGAAGG GACTCCGTAG CGTCCTGATG ATGCCTTTGG GATACAGGGA TAACGATACC GATTGGTTGT CTCCCTTGAA AAAGATTCGC CGTTCTCGCG ATGAGTTTGT TTCCGAAATT CGTTGA
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Protein sequence | MDLIQALKWR YATKRMNPAK TVPEEKVARI VEAARLAPTS SGLQPFEIIV ITNSALREKI KSVSMGQPQV TECSHLLVFA AWDDYTPERI NKMYDYANQE RGGSNEGLEN YRNMLLSTYP QRGAEVNFQH AARQAYIGLA AALLGAAFEE VDSTPMEGFD PSALDDILGL RSKGLRSVLM MPLGYRDNDT DWLSPLKKIR RSRDEFVSEI R
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