| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1325 |
|---|
| Symbol | |
|---|
| ID | 3569254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1442240 |
|---|
| End bp | 1443079 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637679794 |
|---|
| Product | metal-dependent phosphohydrolase, HD region |
|---|
| Protein accession | YP_284545 |
|---|
| Protein GI | 71906958 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.000284432 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00284923 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCGC TCGCACCAAT TCTTCCGTTT CACTTTCGTG TGATCAGCCT TGCGCGTCTG
CCGGCCGCTT CAGGACTGGG CGTTATGAAT GAAGCCATGC TCTATCACGA TGATGCTCAG
TTCAAAGCCT GCTGGACCTC TCGCTACGTG GATACCAGGC TCAAGCGCGG TAGTTGTGTT
GCCTTGCGAG GCGCCTGCTT CCATCAATTC AGGGAAGGGC GTCTGCCCGT CAGTCGGCTC
GACCTGATCG ACAAACCGAT TCCGACCATC AATCCCTTCC TGACCATCCC TGCCGCCTGG
TTTGCTGACC GTGACACGGT GTGTCGCGCG GCCGCGCTCT GGGAGCAGAT GGGGCGTCCC
CTACAGCATT TGTTCAATGC GGTGATGTGG GACGGGGGGC GCTTCTATCG CTATGTCACG
GGGCCTGTCG GATGCAGCGA CTATCCCTGG GAGCATGGGC GCAATTTCAA GCACTCAGTG
GTGGTGGCCG AGCAAGCCGC TACGCTGTCG CGGGGTCTAT CGGGTATCTC GTCCCCTGTT
CTGATCGCCG CCGCATTGCT TCACGATGCA GGCAAGGCCG ACGACTACCG GCTGTCAGCG
GAGGGCTATG TTCTCTCTGA GCGTGGGCAG TGGGTGGGTT ACCAGTACAC GATACTCGAG
TGGCTGGCTG TGGCACGTAC CCGGGTCATT GTTCCGGACT CCCTGTATCT GGCGCTGGTA
CATGCCTTGA TTGCCCGGCG CCATCTCGAG GCACGGGAAA CCCCATCGAT TGAAGCCAGT
GTGTTGGCGA CGGCTGATCG ATTGAGTTGT GACCCTGTGT TCGATGCGTT GGCCCGCTAG
|
|---|
| Protein sequence | MQSLAPILPF HFRVISLARL PAASGLGVMN EAMLYHDDAQ FKACWTSRYV DTRLKRGSCV
ALRGACFHQF REGRLPVSRL DLIDKPIPTI NPFLTIPAAW FADRDTVCRA AALWEQMGRP
LQHLFNAVMW DGGRFYRYVT GPVGCSDYPW EHGRNFKHSV VVAEQAATLS RGLSGISSPV
LIAAALLHDA GKADDYRLSA EGYVLSERGQ WVGYQYTILE WLAVARTRVI VPDSLYLALV
HALIARRHLE ARETPSIEAS VLATADRLSC DPVFDALAR
|
|---|
| |