| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1320 |
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| Symbol | |
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| ID | 3569183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1436224 |
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| End bp | 1437762 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637679782 |
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| Product | peptidoglycan-binding LysM:lytic transglycosylase, catalytic |
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| Protein accession | YP_284540 |
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| Protein GI | 71906953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.0000367153 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0421613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAC GTAACCTTTC GTCGTTTCTT CGCCGTCTGT GCATTACCAG CCTGACCGCG
GCAATCCTGC TTCCAGTTGC TCCCGCTCTA GCTGAGCCAG CAGATAAACC ATCCCTGTTT
TCCCTGATGA TGCCGTCGCT CAGCGATACC GGTTTCAGCG CAACCGAAGA CGTGCTGACC
GTGCAGGAAA TTCGGGTTCC GCCTCAGCTG CCAAACACGA TTGATCTGAC CACCCAGGCA
ACCAACCTGT GGGACAGGAT TCGCAATGGC TTTGCGATGA CCAATCTCAA CGATGATCTG
GTCCTCTATT ACCAGCAGTG GTACCAGAAC CGCCCAGATG CCCTGCGGCG CATGGTCGAG
CGCAGCCGCC CCTACCTGCA CTATATCGTC GAGGAACTTG AGGCCCGCGG CATGCCGACC
GAGCTGGCAT TATTGCCGAT GGTTGAAAGC TCCTTCAACC CGAACGCCTA TTCGCCGGCA
CACGCGGCCG GCCTGTGGCA GTTCATTCCA GCGACCGGCA AGCGTTTTAA TCTGGAGCAA
AACTGGTGGC GTGACGAGCG GCGCGATATC GTTGCCTCGA CCGGGGCAGC ACTGGACTAC
CTGCAAGCCA TCTACGAAAT GCACGGCGAC TGGCATCTGG CGCTGGCTTC CTACAACTGG
GGCGAAGGCG CAGTCAAAAG GGCCATCGTC AAGAACGAAT CACGCGGCCT GCCGGCAGAC
TATCCAAACC TGACGATGCC GAACGAAACC CGGCATTACG TTCCGAAACT GCAGGCGCTA
AAGAATATTC TCGGCAACCC GACATTGATT GCCCAGCTCG GCCTGCCCTT TATTCCCAAT
GAGCCGTACT TCGCAACCCT CGAAACTCGG CGGCCAATTG ATGTCAAGAC AGCAGCCCGC
CTGGCCAACA TGTCGCTGGA CGAGTTTCTG CGACTGAACC CCTCGCACAA CCGCCCGATC
ATCAAGGCCG ACACCTCGGT CGTCGTCCCG GCCGACAAGC TCGACACCTT CCGCGACAAC
CTGCGAAACA ATCAGTCGTC GCTCACCCAG TGGCAAGCCT ACACAGTAAC TTCCGCCGAA
CGGCTGGACA AGATTGCTGC CCGTTTCGAT ACCACGGCCG GCGAACTGGC CCGCGTCAAT
AGCCTCTCGG AAAAGGTTCG GCTCGGCGCC GGCTCAACGG TACTGGTACC TGGCGGCGAT
AGCGGCAGCG GTCTGAGCAA CCTGCTCAAT ACCTCGACCC CGCAACACTT TATCGAGCCG
GAACGGGTTG CCCGTCCGTG TGGCAAGGCT GGCAAGCACG CCAAGTCTTC GGCCAGAGCA
TGCGACAGAC CGGAATCCCG GATCGCTACC AAAGGCAGCC ACTCAAGCGA GCGTGCAGCG
ACCAAGGCTT CTGGCAAATC GGCAAAAAAC GGTCCGGCCC CAAGCAAGGC ACACACCAAG
GCGGCCGAAC ACGGCAAGAC AAAGCCCGCC AGCAGCAAGC CCGTCAAGAG CAGCCCATCC
CACCAGCTCT CCAAATCAGG ACCCAGCCGG CACCGCTGA
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| Protein sequence | MQQRNLSSFL RRLCITSLTA AILLPVAPAL AEPADKPSLF SLMMPSLSDT GFSATEDVLT
VQEIRVPPQL PNTIDLTTQA TNLWDRIRNG FAMTNLNDDL VLYYQQWYQN RPDALRRMVE
RSRPYLHYIV EELEARGMPT ELALLPMVES SFNPNAYSPA HAAGLWQFIP ATGKRFNLEQ
NWWRDERRDI VASTGAALDY LQAIYEMHGD WHLALASYNW GEGAVKRAIV KNESRGLPAD
YPNLTMPNET RHYVPKLQAL KNILGNPTLI AQLGLPFIPN EPYFATLETR RPIDVKTAAR
LANMSLDEFL RLNPSHNRPI IKADTSVVVP ADKLDTFRDN LRNNQSSLTQ WQAYTVTSAE
RLDKIAARFD TTAGELARVN SLSEKVRLGA GSTVLVPGGD SGSGLSNLLN TSTPQHFIEP
ERVARPCGKA GKHAKSSARA CDRPESRIAT KGSHSSERAA TKASGKSAKN GPAPSKAHTK
AAEHGKTKPA SSKPVKSSPS HQLSKSGPSR HR
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