Gene Daro_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1311 
Symbol 
ID3569174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1425720 
End bp1426541 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID637679774 
Producthelix-hairpin-helix DNA-binding motif-containing protein 
Protein accessionYP_284532 
Protein GI71906945 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.314251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC GGGTTCAACA GTTTCGAAAG GCGCTCAAGC TATCGCAGCG GCAACTTGCT 
GAGGCAGTGG GAACAAGCCA GCAGCAGATT CAACGGATCG AATCCGGCCA AATCGCAGCC
AAACTAGAAA TGGCGGCGAA GCTCTGCGCT GCCTTGCAGA AGCCAATGGA GGTCGTATTT
CCGGGGGCAA CCAAAGCACT GAAGTCTGCT GAAAGGGAAA TGAACGCCTC GCATACGTTT
CCTGATGAGG CATGGCAGAA GCTACGAGAA TCGGGAATCG AAGGTGATCC GCGTGAATGG
ACCTTCAAGG TTCTGCTCAA AGGCCATAAC GCACCCATGT TGTTCAGAAT ATCGTCTACT
GAGCAGTCGC GGCTGTATGG TCTGATTCAA GAGGAAAACA GCGATTCCGA GTCTGCATCA
TTCGTGGTCT TCGACACGGA AGATCGTCGC TGGGCACTGA ACCTAGCCGA GTTGGACTTC
TGTCACTTCT TGTTCGACGT CTCTCCTGCT GGTGCGGTCA GGGATGAGTC GGACTCCAAA
GAAACTGAAG AGGAGGCATG TAGCGTCCTT CTCCATTTCA TCGGGGGCGG ATCTCCTATG
GCTCTAGAGG TTGATGTAGA CGAGCCAGAC GACATGGACG ACACAGGGCA ATGTGGACAC
GTCCTCTACA TGCTCGAAAT GGCGCCACAG CAATCCGACC GTTATCGAAT TATCGATAGC
GATGGAGAGC ACGCGTTTAT CCGCGCCGGA TCGATTGCTC TTTTGTCCGT TCCACTTGCT
GTATTGGAGC CACTAGATCG CGATGAGGAT GAGGATGAGT AA
 
Protein sequence
MKNRVQQFRK ALKLSQRQLA EAVGTSQQQI QRIESGQIAA KLEMAAKLCA ALQKPMEVVF 
PGATKALKSA EREMNASHTF PDEAWQKLRE SGIEGDPREW TFKVLLKGHN APMLFRISST
EQSRLYGLIQ EENSDSESAS FVVFDTEDRR WALNLAELDF CHFLFDVSPA GAVRDESDSK
ETEEEACSVL LHFIGGGSPM ALEVDVDEPD DMDDTGQCGH VLYMLEMAPQ QSDRYRIIDS
DGEHAFIRAG SIALLSVPLA VLEPLDRDED EDE