| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1301 |
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| Symbol | |
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| ID | 3569163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1411728 |
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| End bp | 1413263 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637679764 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_284523 |
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| Protein GI | 71906936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.462957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.521043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACTGGA TAAAACGACT ATTACTGTTG ACAGCATCCC TGATCGCCGC CGGTTGCGGC
GAGGTTGGCC CATTGCCATT TCCGACACCA GCCCAGCATG ATCTCGTCGT CCTCACCCGT
CCCGGTCTGC TCACTTATTC GACCGATGAC AACGGCAACC CGGCCGGCAT CGAATACGAT
CTGACACAAG CCTTCGCCCA GGAACTCGGT GTCGGCGTCA GATATGTCGT CGTAGCGCCG
GAAGAACTGG AAGCCCAGCT TACCGAAAGC AAGTATCACC TTGCCGCTGC CTGGCTCTCG
CCAATGGCCA ACAGCGCCAT CCAGTCGACA CCTGCCATTT TTCAGACACG AGACATTCTT
GCCCAGCACG AGGCATCGTT GGCGCTCACT GAACGCTCGC AACTGACCAG CAAGACGGTG
CATGTCATGG CCGGCACCCG CCAGGCGAAA ACGCTGGCCA GCCTGGCCAA GGAAATACCG
GGACTCAAGG TCGTCGAAGT CGGCCAGGGC GACATCCTTG ATCTGCTGGA AAAACTTGGC
AATCGTCAGA TCGAGTACGT CGCTATCGAC GAGGGCTTTG AGGACATTGC CAATCAGTAC
GTTCCCAACC TGCGTACCAC GCTAGCGCTG AGCGAAACCC GTCCGGTAGT CTGGCTGCTC
GGCCAGCACC CAAATGCAGA ACTCAAGGCT CGCCTCGACA CCTTCATCGA GCGAGTGCAA
CACGATGGCA CACTGGCCCG ACTGGAAGAC CGCTACCTCG GCCATGTCCG GCGCCTAGAA
CAAGGCGACA TCATCAAATT TCTTGGTGAG ATAGAAACCA CGCTCCCCAA ATTCCGCAAG
TACTTCCAGG CAGCCCAAGC CCTGACCGGC ATCGACTGGC GATTGATTGC GGCAGTGGCC
TACCACGAAT CGCATTGGGA TCCGAACGCA ACCAGCTATA CCAATGTGCG CGGGATCATG
ATGCTGACCG AAGATACGGC CGACCACCTG GAGGTCAGCA ACCGGCTCGA CCCCAGCGAA
AGCATCCTGG CCGGCGCCCG CTATATCAAT ATGCTGAAGG AACAGTTGCC GGAAGAAACC
GAGGAGCCGG ATCGCACTTG GCTGGCGCTG GCTGCCTACA ATATTGGCCC CGGCCACTTC
AATGCGGCAC GGACGCTGGC CAAACAATTG AAAGCCGACC CAAACACCTG GTACGAGATG
AAGCGGATCT TGCCCAAGCT TGCGCAGCCG AAGGTTTACC AGCAATTGAA GACTGGTCGA
GCTCGGGGTG GTGAAGCAGT GATCCTGGTG GAAAATATCC GCAGCTATTA CGACATTCTG
CAGCGCAATA CCGCCCCCTT CGGACCGACG CCAGCTGCTG CAGAAAGTCT AAAACGGCTG
GTCGCGGAGG TTGAAGGACG TCGAAAAACC TACGTCAGGA AGATGGCTGC CTCAAAGGCC
ATCAATGCCA CCGGCACAGA TACCTCAACA GCCGCATTCA GGCTGCCGAC CATCGAATCA
GGCAAATACC CAGCCCGACC GGCAGAAAAC GAATAA
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| Protein sequence | MYWIKRLLLL TASLIAAGCG EVGPLPFPTP AQHDLVVLTR PGLLTYSTDD NGNPAGIEYD
LTQAFAQELG VGVRYVVVAP EELEAQLTES KYHLAAAWLS PMANSAIQST PAIFQTRDIL
AQHEASLALT ERSQLTSKTV HVMAGTRQAK TLASLAKEIP GLKVVEVGQG DILDLLEKLG
NRQIEYVAID EGFEDIANQY VPNLRTTLAL SETRPVVWLL GQHPNAELKA RLDTFIERVQ
HDGTLARLED RYLGHVRRLE QGDIIKFLGE IETTLPKFRK YFQAAQALTG IDWRLIAAVA
YHESHWDPNA TSYTNVRGIM MLTEDTADHL EVSNRLDPSE SILAGARYIN MLKEQLPEET
EEPDRTWLAL AAYNIGPGHF NAARTLAKQL KADPNTWYEM KRILPKLAQP KVYQQLKTGR
ARGGEAVILV ENIRSYYDIL QRNTAPFGPT PAAAESLKRL VAEVEGRRKT YVRKMAASKA
INATGTDTST AAFRLPTIES GKYPARPAEN E
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