Gene Daro_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1288 
Symbol 
ID3568747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1398686 
End bp1399471 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content59% 
IMG OID637679751 
Productpropable PolB 
Protein accessionYP_284510 
Protein GI71906923 
COG category[L] Replication, recombination and repair 
COG ID[COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.671751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.251577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG TTCTGATTTT TGACATCGAA ACGATTCCCG ATGTCGCCGG CCTGCGCCGC 
CTGAATGATC TGCCGGGTGA GCTTTCCGAC GATGAAGTCG CGGAGCTCGC CTTCCAGCAG
CGTCGGGCCA AGACCGGTAA CGACTTCCTT CAACTGCATC TGCAACGTGT GGTGACCATC
TCCTGCGTGC TGCGGACGAG TGAGGGACTG AAGGTCTGGT CGCTGTCCGA GCCGGATCTG
AATGAAGGTG CAATCATTCA GCGCTTCTTC GATGGCATCG AGAAATTCAC GCCGCAGATC
GTCTCCTGGA ACGGCGGTGG TTTCGACCTG CCGGTACTGC ACTATCGCGG CATGCTGCAC
GGCGTTGCTG CGCCGCGTTA CTGGGACATG GGCGATGGTG ACTACGCTGA CAGTCGCGAT
TTCAAGTGGA ACAACTACAT CAGCCGCTAC CACACACGTC ATCTCGACCT GATGGACCTG
CTGGCGCTTT ATAACGGCCG GGCCAATGCG CCGCTCGACG ATCTGGCCAA GCTGTTCGGC
TTTCCCGGCA AGCTTGGCAT GGATGGTGGC AAGGTCTGGG AAGCCTGGCA GGCCGGCAAG
ATTGCCGAGA TTCGCGATTA TTGCGAGACC GACGTCATCA ATACCTACCT CGTCTATAAC
CGCTTCCGTC GCCTGCGCGG TGAGCTGACG GCCGAAGAAG AGGTCGCCGA GGGCGAATTC
GTCAAGGCGC AACTGGCCAA GATCGGCACG CCGCAATGGC AGGAGTTCCT TGCTGCCTGG
CAATGA
 
Protein sequence
MKPVLIFDIE TIPDVAGLRR LNDLPGELSD DEVAELAFQQ RRAKTGNDFL QLHLQRVVTI 
SCVLRTSEGL KVWSLSEPDL NEGAIIQRFF DGIEKFTPQI VSWNGGGFDL PVLHYRGMLH
GVAAPRYWDM GDGDYADSRD FKWNNYISRY HTRHLDLMDL LALYNGRANA PLDDLAKLFG
FPGKLGMDGG KVWEAWQAGK IAEIRDYCET DVINTYLVYN RFRRLRGELT AEEEVAEGEF
VKAQLAKIGT PQWQEFLAAW Q