Gene Daro_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1287 
SymbolcysM 
ID3568746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1397790 
End bp1398689 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID637679750 
Productcysteine synthase B 
Protein accessionYP_284509 
Protein GI71906922 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01138] cysteine synthase B 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.257463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAAA CCCTGCAGGA TTTTGTCGGA AACACGCCAC TGGTACGTCT GGTGCGTATT 
CCCGGTGCTG ACAACGACAA GCGAGGCAAT GTCATCCTGG CCAAGCTGGA GGGGAATAAT
CCGGCTGGTT CAGTCAAGGA CAGACCTGCG CTGTCGATGA TCGTCCATGC CGAGGCGCGT
GGCGACATCA AGCCAGGCGA TACGCTGATC GAGGCGACCT CAGGTAATAC CGGCATCGCG
CTGGCCATGG CAGCGGCGAT CAAGGGGTAC CGGATGATCC TTGTCATGCC GGAAAACCAG
AGTGTCGAGC GTCGGCAGAG CATGCGTGCC TACGGCGCGG AACTGGTTCT GACGCCCAAG
GATGGCGGTA TGGAACTGGC ACGCGACGTG GCCGACAAGA TGCGCGACGA AGGCAAGGGC
ATCATCCTTG ACCAGTTCGC CAACCCTGAT AATCCGCTGG CCCATTACGA AGGTACCGGC
CCGGAAATCT GGCGCGATAC TGATGGCAAA ATTACCCATT TCGTATCCAG CATGGGAACG
ACCGGGACCA TCATGGGAAC CAGTCGTTTC TTGAAGGAGG CGAACCCGGC CATCGAGATC
GTTGGCTGCC AGCCGGAAGA CGGCAGCCAG ATCCCCGGCA TCCGCAAGTG GCCGGAAGCC
TATCTGCCGA AAATTTTCGA CAAGACCAAT GTCGATCGCG TCGAATACGT CAGTCAGGCT
GATGCTGAGG CGATGACCCG GCGCCTGGCG ATGGAAGAGG GAATTTTTGC CGGCATTTCC
TCGGGTGGTG CGCTCGCCGT GGCCCTGCGC CTGTCGCAGC AACTGGAGAA TGCGGTGATC
GTCTCGATCA TCTGCGACCG TGGTGACCGT TATCTCTCGA CCGGTGTTTT CCCGGCATGA
 
Protein sequence
MYKTLQDFVG NTPLVRLVRI PGADNDKRGN VILAKLEGNN PAGSVKDRPA LSMIVHAEAR 
GDIKPGDTLI EATSGNTGIA LAMAAAIKGY RMILVMPENQ SVERRQSMRA YGAELVLTPK
DGGMELARDV ADKMRDEGKG IILDQFANPD NPLAHYEGTG PEIWRDTDGK ITHFVSSMGT
TGTIMGTSRF LKEANPAIEI VGCQPEDGSQ IPGIRKWPEA YLPKIFDKTN VDRVEYVSQA
DAEAMTRRLA MEEGIFAGIS SGGALAVALR LSQQLENAVI VSIICDRGDR YLSTGVFPA