Gene Daro_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1285 
Symbol 
ID3568744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1395848 
End bp1396786 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content60% 
IMG OID637679748 
ProductD-alpha,beta-D-heptose 7-phosphate 1-kinase 
Protein accessionYP_284507 
Protein GI71906920 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR02198] rfaE bifunctional protein, domain I 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.541266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA ACTTGCTGGA AAAGCTGTCG CAGGTTCGCC TGCTGGTCGT TGGCGACGTG 
ATGCTGGACC GCTACTGGTT TGGCGAGGTG AACCGGATCT CGCCGGAAGC GCCGGTGCCG
GTGGTCAAGG TCGAGCGGAT GGAAGAGCGT CTTGGTGGCG CTGCCAATGT GGCGCGTAAC
GCGGCGTCGC TGGGTGCGGT TTCTGCCTTG TTGTCGGTCG TCGGTGATGA CGAAGCCGGG
CGTACTCTTG GTCGCCTGCT CGACGAAGGG CAGATCGATG CGGCTTTGCA TATGGATCGC
CAGATCGATA CCACGGTCAA GTTGCGCGTC ATTGGGCGAC AGCAGCAGCT ACTGCGTATC
GATTTTGAAA CGACACCGTC GCACGAAATT CTGCAGGCCA AGCTGGCCGA TTTCGAGCAA
CGCGTTGTCC AGGCCGATGT CGTCATTCTC TCGGATTATG GCAAGGGGGG GCTGACGCAT
ATTGCCGAGA TGATCCGCAT TGCCCGTTCC CATGACAAAC CTGTATTGGT CGATCCGAAG
GGTGATGAGT GGGGGAAATA TGCCGGTGCG ACGGTGATTA CCCCGAATCG CTCGGAGTTG
CGGGAAGTGG TCGGTCGCTG GTCTTCCGAG GAGGAGTTGG CTGCCAAGGC GCGCAAGTTG
CGCGGCGAGC TTGGTCTGGA GGCCTTGCTG GTTACCCGTA GCGAAGAAGG GATGACCCTG
TTCGCCGACG ACGCTGTACA TCATCAGCCA GCACTGGCGC GTGAGGTTTT TGATGTGTCC
GGTGCCGGAG ATACCGTCAT TGCCACGTTG GCGGTGATGA TTGCCGCCGG CGCCGATTGG
GACGAAGCCA TTCGTGTGGC CAATATCGCC GCTGGCATCG TTGTCGGCAA GCTCGGAACT
GCCGTGGTTA GCCGCGAAGA ACTCATCGCT GCACTGTAA
 
Protein sequence
MSGNLLEKLS QVRLLVVGDV MLDRYWFGEV NRISPEAPVP VVKVERMEER LGGAANVARN 
AASLGAVSAL LSVVGDDEAG RTLGRLLDEG QIDAALHMDR QIDTTVKLRV IGRQQQLLRI
DFETTPSHEI LQAKLADFEQ RVVQADVVIL SDYGKGGLTH IAEMIRIARS HDKPVLVDPK
GDEWGKYAGA TVITPNRSEL REVVGRWSSE EELAAKARKL RGELGLEALL VTRSEEGMTL
FADDAVHHQP ALAREVFDVS GAGDTVIATL AVMIAAGADW DEAIRVANIA AGIVVGKLGT
AVVSREELIA AL