| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1284 |
|---|
| Symbol | |
|---|
| ID | 3568743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1394525 |
|---|
| End bp | 1395844 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637679747 |
|---|
| Product | UDP-glucose/GDP-mannose dehydrogenase |
|---|
| Protein accession | YP_284506 |
|---|
| Protein GI | 71906919 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.583067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA CCGTCGTCGG TACCGGCTAT GTGGGACTGG TCAGTGGCAC CTGTCTGGCC
GAAGTAGGCA ACGATGTTCT TTGTCTGGAC GTTGATCCGG AAAAGATTCG CATCCTCGAA
GAAGGTGGCA TTCCCATCTT CGAACCCGGT CTGCAAGACA TGGTCCGCCG CAACGTTGCG
GCCGGCCGCC TGCACTTCAC CACCGACGTT GAAAAGGCTG TACAGCACGG CACGGTCCAG
TTCATTGCGG TCGGTACCCC GCCCGATGAA GACGGCTCGG CCGACCTTCA GTACGTCCTC
GGCGCCGCCC GTAACATCGG CCGCCTGATG ACCGACTACA AGGTCGTCGT CGACAAGAGT
ACCGTGCCAG TCGGTACCGG GGCCAAGGTC CATGCTGCCA TTGCTGACGA GTTGCAGAAG
CGCGGAGTCA AGACGCCTTA CAGCGTCGTA TCGAATCCGG AATTCCTGAA GGAGGGTGCT
GCGGTCGAGG ACTTCATGCG TCCCGACCGT ATTGTCGTCG GGGCCGAAGA CGAACAGGCC
ATCCATTTGA TGCGTGCTCT GTACGCCCCG TTCCAGCGCA ACCACGAGCG TCTGATCGTC
ACTGATATCA AGAGTGCCGA GCTCACCAAG TACGCCGCCA ATGCCATGCT CGCCACCCGC
ATCAGCTTCA TGAACGAACT GGCCAACCTG GCCGAAGTGC TGGGTGCCGA CATCGAAATG
GTTCGCCAGG GTATCGGCTC CGACCCGCGT ATCGGCTATC ACTTCCTCTA TCCCGGTTGC
GGCTACGGCG GCTCCTGCTT CCCCAAGGAC GTCAAGGCGC TGATCAAGAC CGCCCAGGAC
GACGCCGATA TCACCCTCAA GGTGCTCACC GCGGTTGAAG AAGCCAACGA TGCCCAGAAG
CACATCCTGA CCAAGAAACT CAAAGCCAGG TTCGGCGATC TCAAAGGCAA GCACTTCGCC
CTCTGGGGGC TCGCCTTCAA GCCCAACACC GACGACATGC GCGAAGCAGC TAGCCGTGAA
TTGATTGCCG ACCTGTTTGA GGCTGGAGCC ACGGTCACCG CCTACGACCC GGTCGCCATG
CACGAAACGC AGCGTATCTA CGGCGACGAA TCGCGTCTGA AATACGCCGA AAATCCGATG
GGTGCGCTTA CCGATGCCGA TGCATTGGTC ATCGTGACCG AGTGGAAAGA ATTCCGCAGC
CCGGACTTCG AAGAGATCAA GAAGGCCCTG AAGAATCCGG TAATCTTTGA TGGTCGTAAC
CTGTATGACC CGAAATTCGT ACGAGCTTCG GGCATCGAGT ATTTCGCGAT CGGGCGTTAA
|
|---|
| Protein sequence | MKITVVGTGY VGLVSGTCLA EVGNDVLCLD VDPEKIRILE EGGIPIFEPG LQDMVRRNVA
AGRLHFTTDV EKAVQHGTVQ FIAVGTPPDE DGSADLQYVL GAARNIGRLM TDYKVVVDKS
TVPVGTGAKV HAAIADELQK RGVKTPYSVV SNPEFLKEGA AVEDFMRPDR IVVGAEDEQA
IHLMRALYAP FQRNHERLIV TDIKSAELTK YAANAMLATR ISFMNELANL AEVLGADIEM
VRQGIGSDPR IGYHFLYPGC GYGGSCFPKD VKALIKTAQD DADITLKVLT AVEEANDAQK
HILTKKLKAR FGDLKGKHFA LWGLAFKPNT DDMREAASRE LIADLFEAGA TVTAYDPVAM
HETQRIYGDE SRLKYAENPM GALTDADALV IVTEWKEFRS PDFEEIKKAL KNPVIFDGRN
LYDPKFVRAS GIEYFAIGR
|
|---|
| |