Gene Daro_1263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1263 
Symbol 
ID3569331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1370784 
End bp1371638 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content58% 
IMG OID637679729 
ProductNAD-dependent epimerase/dehydratase:dTDP-4-dehydrorhamnose reductase 
Protein accessionYP_284488 
Protein GI71906901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.818753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC TCGTTATCGG TGTAAGCGGG ATGCTTGGCA ATGCCATGGT CCGCGTGCTG 
GCTGAAGCAA AGGAGTGGGA AGTGCATGGC ACCTTGCGCT CGCCTTCGGC CAAGCGCTTT
TTTGCGCCGC AAATTGCGGC CAGGCTGCAC GATGGCATCG ATGTCGACCA CGAAGACGCG
CTGGTGGAAA TCTTTGACAA GGTTCGCCCG CAGCTGGTGT TGAACTGCGT CGGCCACGTC
AAGCAAGTGG AAACGGCAGA CCAGCCGCTA CATGCCATAC CGATCAATGC CTTGTTGCCG
CATCGCCTGG CCCGGCTTTG CGGACTGACG CAGTCCAGGT TGGTACATAT CAGCACCGAT
TGCGTATTCA CCGGCAGTCG CGGAGCTTAT CGTGAGAGCG ATTTTCCAGA TGCATTGGAT
TTGTACGGAC GGACCAAGCT GCTCGGTGAA GTGGACTATC CTCACGCGTT GACACTGCGG
ACCTCCATCA TCGGCCATGA GCTCCAATCC TCGCATGGCC TGATCGAATG GTTTCTCGCG
CAGTATGGCA GTTGCCAGGG CTACACCCGT GCAATTTTTT CCGGCCTGCC AACTGTCGTG
CTGGCGGCCG TAGTCCGCGA TGTGATAGCG CAGCGCCCAG ACCTGCACGG GGTCTACCAT
CTGGCGGCCA AACCAATTGC CAAGTACGAC TTGCTGCGTC TAGTAGCCCA AGTTTACGGA
AAACAGATCG ACATCATCCC GGATGATCAG GTGCAGATCG ACCGCTCGCT GGACGGAAGC
CGCTTCCGGG CCGCGACCGG CTATGTCGCC CCTGAATGGC CCGAGCTGGT AAAGACGATG
CACGCATACA GATAG
 
Protein sequence
MKALVIGVSG MLGNAMVRVL AEAKEWEVHG TLRSPSAKRF FAPQIAARLH DGIDVDHEDA 
LVEIFDKVRP QLVLNCVGHV KQVETADQPL HAIPINALLP HRLARLCGLT QSRLVHISTD
CVFTGSRGAY RESDFPDALD LYGRTKLLGE VDYPHALTLR TSIIGHELQS SHGLIEWFLA
QYGSCQGYTR AIFSGLPTVV LAAVVRDVIA QRPDLHGVYH LAAKPIAKYD LLRLVAQVYG
KQIDIIPDDQ VQIDRSLDGS RFRAATGYVA PEWPELVKTM HAYR