Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1230 |
Symbol | |
ID | 3569414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1334876 |
End bp | 1337515 |
Gene Length | 2640 bp |
Protein Length | 879 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637679697 |
Product | DNA gyrase subunit A |
Protein accession | YP_284456 |
Protein GI | 71906869 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0017603 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.486018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAAT TCGCCAAAGA AACTCTGCCG ATCAGCCTCG AAGACGAGAT GCGGCGTTCC TATCTCGATT ACGCGATGAG CGTGATTGTT GGCCGGGCGC TGCCGGATGC GCGCGACGGC CTGAAGCCGG TGCATCGCCG CGTCCTGTTT GCGATGCACG AGCTGAACAA CGACTGGAAC AAGGCGTACA AGAAATCGGC GCGTATCGTC GGTGACGTGA TCGGTAAGTA TCACCCGCAC GGTGATACCG CGGTCTATGA CACGATCGTC CGTATGGCGC AGGATTTCTC GCTGCGCTAC ATGCTGGTTG ATGGCCAGGG TAACTTCGGT TCGGTCGACG GCGATAGCGC GGCGGCAATG CGTTACACCG AAGTCCGCAT GGCTAAGATC GGCCACCAGA TGCTGGAAGA TCTGGATAAG GAAACGGTCG ATTTCGGGCC GAACTACGAT GGTTCCGAAA ACGAGCCGCT GGTCATGCCG GCGCGTATCC CCAACCTGCT GATCAACGGC TCGTCCGGTA TCGCGGTGGG CATGGCGACC AATATCCCGC CGCACAATCT CAATGAAGTC ATCGCCGGCT GCCTGGCGCT GCTGGAAAAT CCGGCACTGA GCATCGAAGA CCTGATTGCC TATATCCCCG CCCCGGACTT CCCGACCGCA GGCTTGATTT ATGGCATGAC GGGGGTCCGC GAGGGTTACC AGACCGGTCG TGGCCGCGTC ATCATGCGTG CTCGGACTCA CTTCGAGGAC ATGGAAAAGA GCAACGGTCG CCAAGCGCTG ATCGTTGACG AGATTCCCTA TCAGGTTAAC AAGAAGTCAC TGATCGAGAA GATCGCCGAA CTGGTCAACG AGAAGAAGAT CGAAGGCATT TCCGATATCC GCGACGAGTC CGACAAGTCG GGCATGCGCA TCGTCATCGA ACTGAAGCGC GGCGAAGTCG GCGAGGTCAT CCTCAATAAC CTGTACAAGC AAACGCAGCT GCAGGATACC TTCGGCATGA ACATGGTCGC GCTGGTCGAT GGCCAGCCGC GCCTGCTCAA CCTGAAGCAG ATGCTGGAAT GCTTCCTGTC GCATCGTCGC GAAGTCATTA CCCGGCGCAC CGTCTACGAA CTGCGCAAGG CGCGCGAACG CGGTCATATC CTCGAAGGTC TGGCTGTTGC GCTGTCCAAT GTTGACGAAA TCATCACCCT GATCAAGGCG GCGCCGACGC CGGCCGATGC CAAGCGCGGC TTGATGGAGC GTACCTGGCG CAGCGCGGTG GTTGAGGAAA TGCTGGTCCG TGCCGCTTCC GATGCCTCGC GTCCGGAAGG GCTGGCGCCG GAATTCGGTT TGTCGGCACA GGGTTATCGC CTGTCCGATG CTCAGGCGCA AGCGATTCTC GAACTGCGAC TGCAGCGCCT GACCGGGTTG GAGCAGGACA AGATCGTCGG CGAGTACAAG GATGTCATGG CCAAGATCCT CGATCTGCTC GACATCCTGG CCAAGCCGGA ACGCATTACT GAAATCATCG TGACCGAGCT GGTGGCGATT CGCGAACAGT TTGGCGACGA GCGGCGCTCG GAAATCATCC TGCAGACGCA CGAACTGAGT CTGGAAGACC TGATCACGCC TCAGGATATG GTGGTTACGC TGTCGCACGG CGGCTACATC AAGGCCCAGC CGCTGGCCGA CTACCGCGCC CAGCGGCGTG GTGGTCGTGG CAAGCAGGCA GCGGCGATCA AGGACGAGGA TTTCGTCGAT CACCTGTTCA TGGCCAATAC CCACGATTTC ATCCTGTGCT TCTCGAACCG CGGCCGTTGC TACTGGCTGA AGGTTTACGA AGCGCCGCAG GGCAGCCGCG TCAGCCGCGG CAAGCCGATC GTCAATCTCT TCCCGTTGGA AGAGGGCGAG CGGATCAACG CCGTGCTGCC GGTCAAGGAA TTCGCCGACG ACAAGTTCAT CTTCATGGCA ACCCGTGCCG GTACCGTCAA GAAGACCCCG TTGTCCGACT TCTCCAATCC GCGCAAGGCC GGCATCATCG CGGTCGACTT GCTTGATGAC GATTATCTGA TCGGCGTCGA ACTGACCACC GGCCAGAGCG ACATTGTGCT GGTTTCCAAC GCCGGCAAGG CCGTTTGGTT CGACGAGGAA GATGTCCGTC CGATGGGTCG TGGTGCCCGT GGCGTCCGAG GCATGAAGCT GCAGGCCGGT CAGGCGGTGA TTTCCCTGCT GGTTGCCGAG AGCGATCAGC AGACCGTGCT GGTCGCTACC GAAAACGGCT TCGGCAAGCG CACGGTATTG GCTGACTTCC GCCATTCCGG TCGCGGCACG CAGGGTGTCA AGGCGATCGC CGACAGCGAG CGCAACGGCG TGGTGATTGG TGCCAAGCTG GTCGACGACA ACGACGAAGT GATGTTGATC ACCACCGGCG GTGTGCTGAT CCGCACCCGC GTCTCGGAAA TTCGTGGCAT GGGCCGGGCA ACTCAGGGCG TGACGCTGAT CTCGCTGGAT GATGGAGAGA AGCTGGCTGG TCTGGAAAAG GTCGCTGAGT CGGTGGCAGA AGCCGAGGTA GAAGGTGAGT CCGAAGTTGT CGCTCCGGAA ACGGGCGATG CTGCACCGAG CGAAGGTGAT GTTGCCAGCA ACGAAGGTGG AGAAGTCTGA
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Protein sequence | MDQFAKETLP ISLEDEMRRS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMHELNNDWN KAYKKSARIV GDVIGKYHPH GDTAVYDTIV RMAQDFSLRY MLVDGQGNFG SVDGDSAAAM RYTEVRMAKI GHQMLEDLDK ETVDFGPNYD GSENEPLVMP ARIPNLLING SSGIAVGMAT NIPPHNLNEV IAGCLALLEN PALSIEDLIA YIPAPDFPTA GLIYGMTGVR EGYQTGRGRV IMRARTHFED MEKSNGRQAL IVDEIPYQVN KKSLIEKIAE LVNEKKIEGI SDIRDESDKS GMRIVIELKR GEVGEVILNN LYKQTQLQDT FGMNMVALVD GQPRLLNLKQ MLECFLSHRR EVITRRTVYE LRKARERGHI LEGLAVALSN VDEIITLIKA APTPADAKRG LMERTWRSAV VEEMLVRAAS DASRPEGLAP EFGLSAQGYR LSDAQAQAIL ELRLQRLTGL EQDKIVGEYK DVMAKILDLL DILAKPERIT EIIVTELVAI REQFGDERRS EIILQTHELS LEDLITPQDM VVTLSHGGYI KAQPLADYRA QRRGGRGKQA AAIKDEDFVD HLFMANTHDF ILCFSNRGRC YWLKVYEAPQ GSRVSRGKPI VNLFPLEEGE RINAVLPVKE FADDKFIFMA TRAGTVKKTP LSDFSNPRKA GIIAVDLLDD DYLIGVELTT GQSDIVLVSN AGKAVWFDEE DVRPMGRGAR GVRGMKLQAG QAVISLLVAE SDQQTVLVAT ENGFGKRTVL ADFRHSGRGT QGVKAIADSE RNGVVIGAKL VDDNDEVMLI TTGGVLIRTR VSEIRGMGRA TQGVTLISLD DGEKLAGLEK VAESVAEAEV EGESEVVAPE TGDAAPSEGD VASNEGGEV
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