Gene Daro_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1228 
Symbol 
ID3569412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1332727 
End bp1333386 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content62% 
IMG OID637679695 
ProductOmpA/MotB 
Protein accessionYP_284454 
Protein GI71906867 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.37425e-26 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.223193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA ATATCGTCAA GAAATCTCTG GTTCTGGCCC TGCTGGCTGG CATCGGCTTC 
TCTGCTGTTG CGCAAGAGCG CGTTTACCTG ATCGACCAGC GTGACGTCGT CGCCAAGAGC
GGCTTCGGTC TGTGCTGGCG CGATGGCTAC TGGACCCCGG CCGCTGCCGC TGCCGACAAG
GCCGGTTGCG AGTGCGACAA GGACCTGTTG CCGGCTTCCG CTTGCGGCGC TGCCCCCGCA
GCCGCCCCGG CCGGTGCCGC TGCTGCTGGC GTGAAGCCGT CCGGTGAAAA GATCACCGTC
GCTGCTGACG CCCTGTTCGA CTTCAACAAG GCTGTCCTGC GTCCGGCTGG TAAAGCCAAG
CTCGACGAGC TGGTCTCCAA GGCCAAGGCC ATCAAGCTTG AAGTGATCCT GGCCGTTGGC
CACACCGACC GCATCGGTTC CGATTCCTAC AACCAGAAGC TGTCCGAGAA GCGCGCTGCC
GCTGTCAAGG AATACCTGGT TGCCAAGGGT ATCGAAGCCA ACCGTGTTTA CACCGAAGGC
AAGGGCGAGA AGCAGCCGGT CACCGGCGAC AAGTGCAAGG GCAATGCCAA GACCAAGGCC
CTGATCGACT GCCTGCAGCC GGATCGTCGC GTCGACATCG AAGTCATCGG CACCAAGTAA
 
Protein sequence
MIKNIVKKSL VLALLAGIGF SAVAQERVYL IDQRDVVAKS GFGLCWRDGY WTPAAAAADK 
AGCECDKDLL PASACGAAPA AAPAGAAAAG VKPSGEKITV AADALFDFNK AVLRPAGKAK
LDELVSKAKA IKLEVILAVG HTDRIGSDSY NQKLSEKRAA AVKEYLVAKG IEANRVYTEG
KGEKQPVTGD KCKGNAKTKA LIDCLQPDRR VDIEVIGTK