Gene Daro_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1225 
Symbol 
ID3569409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1330143 
End bp1331315 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content61% 
IMG OID637679692 
Producthypothetical protein 
Protein accessionYP_284451 
Protein GI71906864 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.000882702 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.259396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACTGG CTGAGCGTCA GCAGGAACTT GATGCAGGGC TGCTGAACTT CCGTGATCTT 
TGGCATCCCC AGCCCTTTCG TGAAATCCGT CCGGACTGGT GCGAGCAATG GCCGGCGCTG
ACCGATGAGT TGCTGGCGCT GCCAGAAGCG TTGGTTGCCG GTCTGAATGA TGATTTGCCT
GCCGCGCTGA ATCTTTTGGC CAAACACGTG CCTGGAGTTG CTGCCATCGC CGCGCTGAGC
GAGTTGCCGG CCATGCCGCA GCAAGCGCTG GCTGAGCGAG CAAAGCATTG GGCTTGGGAG
ATTCCGGGCC GCAAGCGCGA GCAGATCGAG GCTTTTGCTG CGGCCACTGT CAATTGCGGT
CAGCCGGTTC TTGATTGGTG TGGCGGCAAG GGGCATCTCG GCCGTCTTCT GGCGCTGACC
TGGCAGACGC CGGTGCATAC ACTCGAAATC GATGCTGGTC TGTGTGATTC CGGTTCCTCC
TTGGCGCATC GCGCTGGGGT GATGCAGGAA TTTGTCGCTG CCGATGCGAT GGAAACGGCG
ACCTGGCCGC AATCCGGGCA ACACGCGGTG GCGCTGCATG CCTGCGGGGA GCTGCATCGA
CGCCTGATTC AACAGGGGGC CGCAAGGTCC GTTGATTGTT TTGACGTAGC ACCGTGCTGC
TACTACCGAG GGGTTGCCGA GCGCTACCAG CCGCTTTCCG GTGACCTGCA GTTGTCTCTG
AGTCGGGACG ATACCCGTCT AGCGGTCACC GAGACGGTCA CCGCCTCGCC TCGAGAGACC
CGCAAGCGGG ATCGGGCAAT GGCCTGGAAG CTTGGTTTTG ACGCCTGGCG TCGGCAGGTG
TCCGGTGACG CTTACCGGAC ATTCAAGCCG GTGCCCGACA TTTGGATGCG CGCGGAATTT
GCCGAATTTC TGGTCAAGAT GGCAGAACGA GAAGGGCTGG CTCTTCCCTC GGCCGGTGTC
GCTGATGAGT TTGAGGCTCA GGGCTGGGAA CGGCGCCATG ACCTGATGCG CCTGTCGATC
GTTCGCCACG CCTTTCGCCG AGCCATCGAG GTCTGGCTGG TTCTCGATTT GTCGGTATAT
CTCGAAAAGG TAGGCTACGC AGTCGCTTTG GGCAGTTTTT GCGAACGAAA ATTAACGCCG
CGCAACCTGC TTATTTCGGC CCGGCGTGTC TAG
 
Protein sequence
MRLAERQQEL DAGLLNFRDL WHPQPFREIR PDWCEQWPAL TDELLALPEA LVAGLNDDLP 
AALNLLAKHV PGVAAIAALS ELPAMPQQAL AERAKHWAWE IPGRKREQIE AFAAATVNCG
QPVLDWCGGK GHLGRLLALT WQTPVHTLEI DAGLCDSGSS LAHRAGVMQE FVAADAMETA
TWPQSGQHAV ALHACGELHR RLIQQGAARS VDCFDVAPCC YYRGVAERYQ PLSGDLQLSL
SRDDTRLAVT ETVTASPRET RKRDRAMAWK LGFDAWRRQV SGDAYRTFKP VPDIWMRAEF
AEFLVKMAER EGLALPSAGV ADEFEAQGWE RRHDLMRLSI VRHAFRRAIE VWLVLDLSVY
LEKVGYAVAL GSFCERKLTP RNLLISARRV