| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1207 |
|---|
| Symbol | |
|---|
| ID | 3569463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1312573 |
|---|
| End bp | 1313328 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637679674 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_284433 |
|---|
| Protein GI | 71906846 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 71 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.882488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC CGCCGGTCAT CGAACTGAGC GGCGTGACGG CCAGTTTTCG CGGACAAATG
GTGCATCGCG ATCTGGCCTT GCGGGTGGAG GAGGGCCAGA TCGTTGGACT GCTTGGCGGT
TCCGGGAGCG GCAAAACGAC GCTGCTGCGC GAAATCCTTG GCTTGTTGCG GCCGGATACA
GGCATCGTCC GTCTATTCGG CGTCGACCTC AACGATCCGG ATGTCGTTCT GCAACGGGAT
GTGCGGCGGC GTCTAGGGAT GTTGTTTCAG CACGGCGCAT TATTTTCCGC CTTGTCAGTG
TTCGACAACA TTGCTTTCCC CTTGCGCGAA CTTCGTTGTC TTGATGAGGA TTGGATACGA
CGGCTGGTCC ATCTCAAGCT GGCGATGGTC GGTCTGGAGG AAGTGCATGG CAAGCAGATG
CCTGCCGAGT TGTCAGGCGG GATGGTCAAG CGCGTTGCGC TGGCCCGGGC GCTGGCACTG
GAGCCTGAAC TCTTGCTGCT CGATGAACCG ACGGCCGGCC TCGACCCGGA TCGCAGCCAG
AATTTTGTCG AGCTGGTCGG CAATTTGCAG CGCGAACTTG GCCTGACGGT GGTCATGGTC
ACCCATGACC TCAATACCCT GGCCGGACTC GCCACCCATG TGGCCGTCCT GGCTGATCAA
CAGATCGTTG CCTTTGGCAC AAGGGCCGAA ATCATGACGG TCGATCATCC CTTCGTCACC
GGCTTTTTTG GCGCTGATCG CCGGAAACTG CTTTAA
|
|---|
| Protein sequence | MSQPPVIELS GVTASFRGQM VHRDLALRVE EGQIVGLLGG SGSGKTTLLR EILGLLRPDT
GIVRLFGVDL NDPDVVLQRD VRRRLGMLFQ HGALFSALSV FDNIAFPLRE LRCLDEDWIR
RLVHLKLAMV GLEEVHGKQM PAELSGGMVK RVALARALAL EPELLLLDEP TAGLDPDRSQ
NFVELVGNLQ RELGLTVVMV THDLNTLAGL ATHVAVLADQ QIVAFGTRAE IMTVDHPFVT
GFFGADRRKL L
|
|---|
| |