Gene Daro_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1197 
Symbol 
ID3570138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1300610 
End bp1301689 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content61% 
IMG OID637679664 
ProductABC transporter related 
Protein accessionYP_284423 
Protein GI71906836 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAC TTGAACTCAG TGGCGTCGTT CAGCGTTACG GCAAGCACAC CGTTGTCGAT 
GGCGTGAATT TCCGGCTCGA AGGTGGCAGC ATTGCCTGCC TGCTCGGCCC GTCGGGGTGT
GGCAAGACCA CGCTGCTGCG GTGCATCGCC GGCTTTGAAG ACATTTCCGG GGGCGAGATC
AGCCTGCGCG GCGAAGTCGT CAGCCGCGCC GGGCAACGCG TTGCCCCGGA AAAACGGCGG
ATCGGCATGG TTTTTCAGGA CTACGCGCTC TTCCCTCACC TCTCCGTCGA GGAAAACGTG
GCTTTCGGCC TGGGGCGCAA GCCGGCCGAG GATGCCCATC TACGCGTCAG GCAATTGCTG
GCCACCGTCG GCCTGCATGG CCAGGGCAAC AAGTACCCGC ATGAACTCTC CGGCGGCCAG
CAGCAACGCG TGGCACTGGC CCGTGCATTG GCACCACGGC CGGAACTGAT CCTGCTCGAC
GAGCCTTTCT CCAACCTTGA CGTCGGTTTG CGTGAACGAC TTTCGGTTGA AGTCCGCGAA
ATTCTCAAGC GCGAGGGTTC GACCGCCATC ATGGTCACCC ATGATCAAAA CGAGGCTTTC
GCCATGGCCG ACGAAATCGG CATCATGCAC GAAGGCCGCA TCCAGCAGTG GGATGTGCCC
TACAACCTTT ACCACCGGCC AGCCAACCGT TTCGTTGCCG ACTTCATCGG CCAGGGCGTA
CTACTACCCG GCGTGGTTGC TGGCGGCACC AATGTCGAGA TGGAACTCGG CCAGCTGGTT
TCCGACATTG CGGTTGAATG CAGTGAAACC TGCGCCAATT GCGGCGACGG TTGCGAGGTC
GATGTCCTGC TGCGCCCCGA TGACATCGTG CACGACGATC GCAGCCCCTT GCAGGCTGAA
GTGCTGCACA AGGCTTTCCG CGGAGCCGAC ATTCTCTATT CGCTACGCCT GAAGAGTGGC
GCCGAAGTGC TCTCGCTGGT TCCTTCGCAC CACAATCATG CGATTGGCGA AAAAATCGGC
ATCCGGCTCG ACGCCGATCA TGTCATTGCC TTCAAGAAGC TGAACGACCA ACACGCATGA
 
Protein sequence
MAQLELSGVV QRYGKHTVVD GVNFRLEGGS IACLLGPSGC GKTTLLRCIA GFEDISGGEI 
SLRGEVVSRA GQRVAPEKRR IGMVFQDYAL FPHLSVEENV AFGLGRKPAE DAHLRVRQLL
ATVGLHGQGN KYPHELSGGQ QQRVALARAL APRPELILLD EPFSNLDVGL RERLSVEVRE
ILKREGSTAI MVTHDQNEAF AMADEIGIMH EGRIQQWDVP YNLYHRPANR FVADFIGQGV
LLPGVVAGGT NVEMELGQLV SDIAVECSET CANCGDGCEV DVLLRPDDIV HDDRSPLQAE
VLHKAFRGAD ILYSLRLKSG AEVLSLVPSH HNHAIGEKIG IRLDADHVIA FKKLNDQHA