| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1177 |
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| Symbol | |
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| ID | 3569303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1281792 |
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| End bp | 1282985 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637679644 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_284403 |
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| Protein GI | 71906816 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAA ACAGCATTGA TCTCCGTTCC CGCCTGGCCG ACCCGATGGT ACGGCGCACC
GTTTTCGTTG TCCTGACCGC GCTCCTTCTT GCCGGCGGTG TTGGCGTTTG GCGCGCCAGC
CATTCGAAGC CTGTCGGGCT TGTTGAAAAA CCGCATGCGC CATCCAACCG CCTGAGCTTG
CCGGAAGAGG CCGGACAACT GGCCTTCCTT AAACTGGAAA CCGTGGCGAC AGCGTTGCTG
CCAGCGAGCG AGCCGATGAA TGCCCGTTTG GCGCTGGCCG AAGACTCGAC TGCCCGCATC
TTCCCCCCTT TGGCTGGCCG CGTGATTTCG CTGCAGGCGT CGATTGGCGA TCCCGTCAAA
TCCGGTGCTC CGCTGGCTAT TCTGGATGCC CCCGATTTCG GCCAGGCGAT TGCCGATCTG
CGCAAGGCGG AGGCCGACAG TAACCAGAGA CGCAAGGCGC TGAGCCGGGC AGAAATCCTT
TTCGAAGGCG AGGCCTTGGC CCGCCGCGAT TTGGAGTCGG CCGAAGCCGA TGCCCATGCC
GCCAATGCCG AGGCCGAACG AGCCCGCCTG CGCCTGAGCA ATCTGGTGCC GTCTGGCAGC
AAGATCGAGG GGCAACGTCT GGTCTTGCGC GCTCCGCTGG CCGGCATCGT GGTCGACCGC
CAGGCCAATC CCGGCACCGA AGTCCGTCCG GATGCGGCCA ACCCGCTCTT CATCATCTCC
GACCTGCGCC ACCTGTGGCT GAACATCGAC CTGCCGGAAA AGGCAAGCGC CCTGGCAAAA
CCAGGCGAAA CCGTCAATTT CACGCTTGAT GCTTACCCCG GCATCGACTT TGCCGGCCGG
GTTGATCGGG TCGGCGCGGT GGTCGATCCC GCCACTCGGC GGATTCCGGT TCGTGCCATC
GTCGACAATG CCGATGGCCG CCTGAAGCCG GAAATGTTTG CCCGCGCCAC GCTGAGTGCG
CCGGATGCCG CCCAGGTGGT CCGGCTTCCG GTCAGCGCCG TGTTGACCGG CGGCCTGTCC
GCGCATGTCT TCGTCCAGGT CGGGCCGCGC GATTTCGAGC GGCGGATTGT CACCATCGCC
CGCCAGGATG CTGAGTTTGC CTACCTGACG CCTGAGTCCG CAGTGAAGGC AGGCGACATT
GTCGTTGTGC GTGGCGCCAT GCTGCTCGCC TCGGAACTGG CGCAGGGAGA ATAA
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| Protein sequence | MTRNSIDLRS RLADPMVRRT VFVVLTALLL AGGVGVWRAS HSKPVGLVEK PHAPSNRLSL
PEEAGQLAFL KLETVATALL PASEPMNARL ALAEDSTARI FPPLAGRVIS LQASIGDPVK
SGAPLAILDA PDFGQAIADL RKAEADSNQR RKALSRAEIL FEGEALARRD LESAEADAHA
ANAEAERARL RLSNLVPSGS KIEGQRLVLR APLAGIVVDR QANPGTEVRP DAANPLFIIS
DLRHLWLNID LPEKASALAK PGETVNFTLD AYPGIDFAGR VDRVGAVVDP ATRRIPVRAI
VDNADGRLKP EMFARATLSA PDAAQVVRLP VSAVLTGGLS AHVFVQVGPR DFERRIVTIA
RQDAEFAYLT PESAVKAGDI VVVRGAMLLA SELAQGE
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