| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1156 |
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| Symbol | |
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| ID | 3570116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1260414 |
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| End bp | 1261823 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679623 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_284382 |
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| Protein GI | 71906795 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 75 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAGA CAACAGAAGG CAATTGCATT GCCCTGACAC ACCTGGTCGA AGGTAATCCT
GTGGCGACGA TCGTTATCGA CGCCCAGCAT CGAGTGACCC ACTGGAATCG GGCCTGTGCC
GTGCTGACCG GGGTGTCGGC AGAGGACATG ATTGGCCGTT CCGAACAGTG GCGCGCATTT
TACGATTCGG CTCGTCCGAT TCTTGCCGAT TTCGTGGTGG ATGGCGTCAA CGATGTCGAG
GTCGATCAAT ATTATGATGG CAAATCGCGG CGTTCGGCCC TGATTCCGGA TGCTTTCGAG
GCCGAGGATT TTTTCCCGGC TTTCGGGCAT GGGGGACGCT GGCTGTTTTT TACGGCAGCC
GCGATCCGTA ATGCCGATGG TGAGGTCATC GGGGCAATCG AAACCCTGCA GGATGTGACT
GAGCGACGCC TCGCCGAAGC TGCGCTGCGC GAAAATGAGG CGTATCTGGC GCAAATCGTC
GATGGTTCTT CGGTGGCAAT GCTGGTCATT GATGCGCAGC ATCGGGTGAC TCACTGGAAC
AGGGCATGCG AGATGTTGAC CGGTACCTTG GCCAAGGATG TCATCGGTAC TGGCAACCAG
TGGCAAAGCT TTTACGCCTC AAAGCGTCCG ATCATGGCTG ATCTGATCAT CGACGACGCC
AGGGAAAATG CCGTCGATCG CTTGTATCAC GGGCGCTTTC GGCCATCGCC GCTGATTCTT
GGCGGTTACG AAGCCGAAGA TTTTTTTCCG CATTTCGGAG AGAGCGGCCG CTGGTTGTTC
TTTACGGCAG CACCCCTGCG CAATGGCGCC GGCCAGGTGA TCGGCGCCAT CGAAACCCTG
CAGGATGTGA CCGAGCGCCG GCGGGCCGAA GAGGCCTTGC GTGAAAGTGA AGAGCGCTAT
CGTTCCCTGA GCCAGACCGA CTCGCTGACC GGCTTGTTCA ACTCACGCCA TCTGCACGAG
CAGCTCCCCA ACGAATTGGA GCGGGCTGGG CGCTATGGGC GACCCCTGTC GCTGCTGGTG
CTCGACTGCG ATAACTTCAA GTGCGTCAAT GACCGCTACG GCCATCTGGG GGGGGACAAG
GTATTGCAGA GTTTGGCTAC GGCCATCGGG CATTGCCTGC GCCGGTCGGA TTTTGCATTT
CGCTATGGCG GTGAGGAGTT TGTCGTTTTG TTGCCGGAAA CCGCTATCCA GGCGGCTTTG
GCGATTGCCG AGCGTCTGCG TAGCCAGTTT GCCAGCATTG AAACGCCCGC TCCCTCTGGC
GATGCCATTT GCTGTACGGT CAGTATCGGG GTGGCTGAAT GCGTGCCCGG CGAGAGCGAG
GCATCGCTGG TTCGGCGAGC TGACGAAGCA TGCTATATGG CCAAGGCGCG CGGCAAGAAC
TGCGTTGTCA TGGCTGGCTT AAGCGGCTGA
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| Protein sequence | MTQTTEGNCI ALTHLVEGNP VATIVIDAQH RVTHWNRACA VLTGVSAEDM IGRSEQWRAF
YDSARPILAD FVVDGVNDVE VDQYYDGKSR RSALIPDAFE AEDFFPAFGH GGRWLFFTAA
AIRNADGEVI GAIETLQDVT ERRLAEAALR ENEAYLAQIV DGSSVAMLVI DAQHRVTHWN
RACEMLTGTL AKDVIGTGNQ WQSFYASKRP IMADLIIDDA RENAVDRLYH GRFRPSPLIL
GGYEAEDFFP HFGESGRWLF FTAAPLRNGA GQVIGAIETL QDVTERRRAE EALRESEERY
RSLSQTDSLT GLFNSRHLHE QLPNELERAG RYGRPLSLLV LDCDNFKCVN DRYGHLGGDK
VLQSLATAIG HCLRRSDFAF RYGGEEFVVL LPETAIQAAL AIAERLRSQF ASIETPAPSG
DAICCTVSIG VAECVPGESE ASLVRRADEA CYMAKARGKN CVVMAGLSG
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