| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1151 |
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| Symbol | |
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| ID | 3570111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1255520 |
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| End bp | 1257388 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679618 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_284377 |
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| Protein GI | 71906790 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCGG CAAGTTGTAA AGGAGTGCAA ACAGGGGGAC GGCTGCTTAC AAATCGTTAC
GTACTGCATG CTATATTGCC GCGCATGAAT GACAAGAATG TAGGCGAACA TCGCCTGGCA
CTGACCGAAG TGCTCGATTG GATGGTGGAG GATGGGCTGG TTAGCCGTGA GGCTGCCGAC
TCGCTGAAGG CCGAGCGCCG TTTGCATGGG GGAAAGATTC ATCCCCTGAT CGTCATCGCC
GATCAAAAAT GGCGCACAAC CAAGCCGCCT ATCCGCTTGC TCAGTCTGGA AGTGCTCACC
GAGTGGCTGG CCGCCCGCTG CGGGTTCGAC TACCTGCATA TCGATCCATT GAAAATCGAC
TTCACCGGTG TTGCCGAGGT GATGTCCAGC GCCTACGCCG CTCGCTTCGG TATCCTGCCG
GTGCAGGTGA CGACGCGGGA AATCGTCATC GCGACGGCTG AACCCTTCGT TCGCGAATGG
GTTGAGGAGT TGCAGCAGAT TCTGCGCAAG CAGATTCGCC GGGTGATGGC CAATCCGGAT
GACATCAGCC GCTACCTGGT CGAATTCTTC AATCTGGCCA AGTCGGTCAA GAAGGCGGCA
GCCAAGGGCG AGGTCACTTC CGGCCTGTCG AGCTTCGAGC AACTGGTCGA ACTGGGCAAG
GGCAACAAGC AGTTCGACGC CAACGACCAG CACATCGTCC ACATTGTCGA TTGGCTATGG
CAATACGCCT TCGACCAGCG GGCTTCCGAC ATCCACATCG AGCCGCGCCG CGACCTCGGT
ATCGTTCGTT TCCGTATCGA CGGCGTGCTG CATCAGGTCT ACCAGATTCC GATGACGGTC
ATGAACGCCA TGACCAGCCG CATCAAGCTG CTGGGCCGGA TGGATGTGAT CGAGAAGCGT
CGGCCGCAGG ATGGCCGGAT CAAGACGCGC ACGCCGGCCG GGCAGGAGGT CGAGCTGCGT
TTATCAACGT TGCCGACCGC CTTCGGTGAA AAGCTGGTCA TGCGGATTTT TGACCCGGAA
GTGCTGGTTC GCGATTTCCG CTCACTCGGT TTTTCTGACG AGGATCAGGC GCGCTGGAAG
CAGATGACCG CCTTGCCAAA CGGCATCATT CTGGTGACCG GTCCGACCGG CTCGGGCAAG
ACGACGACGC TGTACACGAC GCTGAAGCAG CTGGCGACAC CGGAGGTTAA CGTCTGCACC
ATTGAAGACC CGATTGAAAT GGTCGAGGCT GCCTTCAACC AGATGCAGGT TCAGCAGAGC
ATCGATCTTG GTTTTTCCGA CGGCGTTCGC GCCCTGATGC GCCAGGACCC GGACATCGTG
ATGATCGGTG AAATCCGCGA TCTGGAAACC GCCGAAATGG CCATCCAGGC AGCCTTGACC
GGTCACCTTG TGTTGTCGAC GCTGCATACC AACGATGCGC CGTCGGCGAT TACTCGCCTG
CTCGATCTCG GTGTGCCGGC CTATCTGATC AACTCGACCC TGCTCGGTGT CATGGCCCAG
CGCCTGGTCC GGACACTGTG TCCGCATTGC AAAAAGCCGA CGCCGACCAC CGAGGATCAA
CGCGCTGCCT GGCGTTCGCT GGTGGCTCCC TGGAAATCGG CAGAGCCGGC GCAGATCTGG
CAGCCGGTCG GCTGCCTGGA GTGTCGAATG ACCGGCTATA CCGGTCGGGT GGGCGTTTAC
GAAATTCTGG TTAACTCGCC TGAGATTCGC CGGCTGATCA AGCCACTGAC TGAAATTCCC
AAGTTACGCG AGCAGGCTTT CCGCGAGGGC ATGCGACCAC TACGCATTTC CGGTGCCCTG
AAGGTGGCTC AGGGAGTGAC CTCGCTGGAA GAAGTCATCA AAGTCGCCCC TCCGTCTGAT
GATAGTTAA
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| Protein sequence | MFPASCKGVQ TGGRLLTNRY VLHAILPRMN DKNVGEHRLA LTEVLDWMVE DGLVSREAAD
SLKAERRLHG GKIHPLIVIA DQKWRTTKPP IRLLSLEVLT EWLAARCGFD YLHIDPLKID
FTGVAEVMSS AYAARFGILP VQVTTREIVI ATAEPFVREW VEELQQILRK QIRRVMANPD
DISRYLVEFF NLAKSVKKAA AKGEVTSGLS SFEQLVELGK GNKQFDANDQ HIVHIVDWLW
QYAFDQRASD IHIEPRRDLG IVRFRIDGVL HQVYQIPMTV MNAMTSRIKL LGRMDVIEKR
RPQDGRIKTR TPAGQEVELR LSTLPTAFGE KLVMRIFDPE VLVRDFRSLG FSDEDQARWK
QMTALPNGII LVTGPTGSGK TTTLYTTLKQ LATPEVNVCT IEDPIEMVEA AFNQMQVQQS
IDLGFSDGVR ALMRQDPDIV MIGEIRDLET AEMAIQAALT GHLVLSTLHT NDAPSAITRL
LDLGVPAYLI NSTLLGVMAQ RLVRTLCPHC KKPTPTTEDQ RAAWRSLVAP WKSAEPAQIW
QPVGCLECRM TGYTGRVGVY EILVNSPEIR RLIKPLTEIP KLREQAFREG MRPLRISGAL
KVAQGVTSLE EVIKVAPPSD DS
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