Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1149 |
Symbol | |
ID | 3570109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1253933 |
End bp | 1254769 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637679616 |
Product | putative signal transduction protein |
Protein accession | YP_284375 |
Protein GI | 71906788 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 0.506889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGTTA AGGCTGTTTT CGAGAAGATT GCTGGTGATG CAAGTCGCGG TGAGATGGTG TTTCCGACCC ATGCCGAAAT CGACTTGCTG GTTCGACGCA AGCTCGACGA CCCGGATTGC TCGACCGAAC AATTGGGCAA GCTGATCGCG GCTGAACCCA TCCTTTCGGC CAAGGTGGTC GCCATGGCCA ATTCGGTCGC CTACAACCCG TCCGTGCGGG GCATCAGTGA TGTTCGCAGC GCTATTTCCC GGCTCGGCTT CAATACCTTG CGTACGCTGG TAACGGCTCT CCTGGTTCGT CAGATGCAGG GCATGTCGAA ATTACCGGAG CATCAGGCGC TGGCGCGGCG GCTTTGGGAG CACACTGCGC AAGTCGCTTC CCTGGCTCGG GTCATCGCCC GACGCGTCAC CCGGCAAGAC CCGGAAGCCG CATTCTTTGC CGGGATCGTG CATGAAGTAG GTGGCTTCTA CCTGATCTCG CGTGCGGCCG AGTTTCCGGA ACTGTTTCAG AATAATCTGG AAGCATGGTC GGACGAAGGG GAAGCGCTCG TGGGCAGGGC CGTGTTAAAT ACCCTGGGGG TTCCGGCGGC TATTCGCGAC GCGCTGGAAA CGCTCTGGGA TGGCTATCTT GCGATGCCGG CCGAGTCGCT GGGCGATACC TTGCTTTTGG CCGATCAGCT CGCATCGATC GAATCGCCGC TCCTCGAACT TTCAGGAATG GGCTGCAAGG GCATGGCGGC CGATATCAAT CTGCAGGTGG ACGGCGATAC ATTGAGCGCC ATTCTGCTTG ATTCGGCGGA AGAGGTTGAA TCACTGACGT CGCTGCTGAA TAGCTAG
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Protein sequence | MDVKAVFEKI AGDASRGEMV FPTHAEIDLL VRRKLDDPDC STEQLGKLIA AEPILSAKVV AMANSVAYNP SVRGISDVRS AISRLGFNTL RTLVTALLVR QMQGMSKLPE HQALARRLWE HTAQVASLAR VIARRVTRQD PEAAFFAGIV HEVGGFYLIS RAAEFPELFQ NNLEAWSDEG EALVGRAVLN TLGVPAAIRD ALETLWDGYL AMPAESLGDT LLLADQLASI ESPLLELSGM GCKGMAADIN LQVDGDTLSA ILLDSAEEVE SLTSLLNS
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