Gene Daro_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1135 
Symbol 
ID3570153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1240964 
End bp1242130 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID637679602 
Productmajor facilitator transporter 
Protein accessionYP_284361 
Protein GI71906774 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.551185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACC CCGTCCTCGT CATCGTCATT GCCCAACTGT TCGGCACCTC GCTGTGGTTC 
TCGGCCAACA GCGCAGCCGA CGATCTGATC CGCGCCTGGG GCATAGCGCC GGCCGACATC
GGCACACTGA CCAATGCCGT GCAACTCGGT TTCATCCTCG GTACGCTGAC CTTCGCGGTG
TCCGGGTTGG CCGACCGCTT CGCGGCGAGC CGAATCTTCG CCGTCTGCGC CGTGCTGGGC
GCCCTGTGCA ATGCCGCCTT TGCCCTGCTG GCCGATGGCA TGGGCACGGC CATTCCCCTG
CGCTTTGCGG TTGGTTTCTG TCTGGCTGGC GTCTACCCGC TGGGCATGAA ACTGGTGGTG
AGTTGGGTGC CCGAGCGGGC CGGTGCCGCG CTGGCCCAAC TGGTCGGCAT GCTCACCTTG
GGGACGGCCT TGCCGCATGG CATCCGGCTG GCCGGGGCAG GGTGGTCGTG GCAGGCGACT
ATCCTCATCT CCTCCGGGCT GGCGCTGGTC GCTGCCGCTA TGATTTCATG GCTCGGTGAC
GGCCCCCATC TGAAGCGTCG GCATGGCGCA CCGCCCCTGC GGCTTGGCCG GGTGTTCTAT
GCCTTCTCGG TGCGCGAATT CCGGGCCTCG GCACTGGGCT ATTTCGGCCA CCAGTGGGAG
TTGTATGCCT TCTGGACCCT GACGCCGGCG TTGGTCATCC TGAGTGGATT GGCAGAGTCA
GGGAGCCGTG AGCTTTCCGG GCTGGCCTTT GCCATCATCG GCATCGGCGC CATCGGTTGC
CTGTTCGGTG GCTGGTGGAG CCAGCGTATC GGCAGTGCCC GCGTGGCAGC AACAGCATTG
GCTGTTTCGG CCTTCTGCTG TGCCTTGTTC CCGTTGATTG GCGATTGGCC AGCCTGGGCA
AGGATCGCCT TGTTGCTGCT CTGGGGCGCC AGCGTGGTGG CCGACTCACC GCATTTCTCG
GCACTTTCGG CTCGCGCCTG TCCGCCGGAA ATCGTTGGCA GCGCTCTGGC TTTCCAGAAT
TCGATCGGCT TTGCCATCAC CATGGTGTCG ATCCAGCTTG GTACCGCCTG GATTGGCGGT
TGGGGGACGA GTATCGCGTG GCTCCTCTTG CCCGGGCCGC TGCTTGGTCT GCTCGGCCTC
TATCCCCTGT GGCGGGCTTC CCGCTGA
 
Protein sequence
MQNPVLVIVI AQLFGTSLWF SANSAADDLI RAWGIAPADI GTLTNAVQLG FILGTLTFAV 
SGLADRFAAS RIFAVCAVLG ALCNAAFALL ADGMGTAIPL RFAVGFCLAG VYPLGMKLVV
SWVPERAGAA LAQLVGMLTL GTALPHGIRL AGAGWSWQAT ILISSGLALV AAAMISWLGD
GPHLKRRHGA PPLRLGRVFY AFSVREFRAS ALGYFGHQWE LYAFWTLTPA LVILSGLAES
GSRELSGLAF AIIGIGAIGC LFGGWWSQRI GSARVAATAL AVSAFCCALF PLIGDWPAWA
RIALLLLWGA SVVADSPHFS ALSARACPPE IVGSALAFQN SIGFAITMVS IQLGTAWIGG
WGTSIAWLLL PGPLLGLLGL YPLWRASR