Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1135 |
Symbol | |
ID | 3570153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1240964 |
End bp | 1242130 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637679602 |
Product | major facilitator transporter |
Protein accession | YP_284361 |
Protein GI | 71906774 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 0.551185 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACC CCGTCCTCGT CATCGTCATT GCCCAACTGT TCGGCACCTC GCTGTGGTTC TCGGCCAACA GCGCAGCCGA CGATCTGATC CGCGCCTGGG GCATAGCGCC GGCCGACATC GGCACACTGA CCAATGCCGT GCAACTCGGT TTCATCCTCG GTACGCTGAC CTTCGCGGTG TCCGGGTTGG CCGACCGCTT CGCGGCGAGC CGAATCTTCG CCGTCTGCGC CGTGCTGGGC GCCCTGTGCA ATGCCGCCTT TGCCCTGCTG GCCGATGGCA TGGGCACGGC CATTCCCCTG CGCTTTGCGG TTGGTTTCTG TCTGGCTGGC GTCTACCCGC TGGGCATGAA ACTGGTGGTG AGTTGGGTGC CCGAGCGGGC CGGTGCCGCG CTGGCCCAAC TGGTCGGCAT GCTCACCTTG GGGACGGCCT TGCCGCATGG CATCCGGCTG GCCGGGGCAG GGTGGTCGTG GCAGGCGACT ATCCTCATCT CCTCCGGGCT GGCGCTGGTC GCTGCCGCTA TGATTTCATG GCTCGGTGAC GGCCCCCATC TGAAGCGTCG GCATGGCGCA CCGCCCCTGC GGCTTGGCCG GGTGTTCTAT GCCTTCTCGG TGCGCGAATT CCGGGCCTCG GCACTGGGCT ATTTCGGCCA CCAGTGGGAG TTGTATGCCT TCTGGACCCT GACGCCGGCG TTGGTCATCC TGAGTGGATT GGCAGAGTCA GGGAGCCGTG AGCTTTCCGG GCTGGCCTTT GCCATCATCG GCATCGGCGC CATCGGTTGC CTGTTCGGTG GCTGGTGGAG CCAGCGTATC GGCAGTGCCC GCGTGGCAGC AACAGCATTG GCTGTTTCGG CCTTCTGCTG TGCCTTGTTC CCGTTGATTG GCGATTGGCC AGCCTGGGCA AGGATCGCCT TGTTGCTGCT CTGGGGCGCC AGCGTGGTGG CCGACTCACC GCATTTCTCG GCACTTTCGG CTCGCGCCTG TCCGCCGGAA ATCGTTGGCA GCGCTCTGGC TTTCCAGAAT TCGATCGGCT TTGCCATCAC CATGGTGTCG ATCCAGCTTG GTACCGCCTG GATTGGCGGT TGGGGGACGA GTATCGCGTG GCTCCTCTTG CCCGGGCCGC TGCTTGGTCT GCTCGGCCTC TATCCCCTGT GGCGGGCTTC CCGCTGA
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Protein sequence | MQNPVLVIVI AQLFGTSLWF SANSAADDLI RAWGIAPADI GTLTNAVQLG FILGTLTFAV SGLADRFAAS RIFAVCAVLG ALCNAAFALL ADGMGTAIPL RFAVGFCLAG VYPLGMKLVV SWVPERAGAA LAQLVGMLTL GTALPHGIRL AGAGWSWQAT ILISSGLALV AAAMISWLGD GPHLKRRHGA PPLRLGRVFY AFSVREFRAS ALGYFGHQWE LYAFWTLTPA LVILSGLAES GSRELSGLAF AIIGIGAIGC LFGGWWSQRI GSARVAATAL AVSAFCCALF PLIGDWPAWA RIALLLLWGA SVVADSPHFS ALSARACPPE IVGSALAFQN SIGFAITMVS IQLGTAWIGG WGTSIAWLLL PGPLLGLLGL YPLWRASR
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