| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1129 |
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| Symbol | |
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| ID | 3570147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1235629 |
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| End bp | 1237029 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637679596 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_284355 |
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| Protein GI | 71906768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 0.965871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG ACACCACCGC AGGCCAAAGT TTTGACACGC TACCGCTGTC GCCGGCCATG
CTGGCCAATC TGGCGCAGCT TGAATACTTG AGCATGACGC CTATCCAGGC GGCCAGCCTG
CCCCTGGCGC TGGCCGGCAA TGATCTGATC GCCCAAGCCA AGACTGGTAG CGGCAAGACC
GCCGCCTTTG GTCTTGCCTT GCTCAATCGC CTGAACACCA GTCGTTTCGC CGTGCAGGCC
ATGGTGCTGT GCCCGACCCG TGAACTGGCC GATCAGGTGA CGCAGGAAAT CCGGCGTCTG
GCCCGTTTTG AAGAGAACAT CAAGGTGTTG TCGCTGGTTG GTGGCTCAAC GCTGCGCAAT
CAGGCGAACA GCCTGGAAAA AGGCGTCCAC ATAGTCGTTG GCACGCCAGG TCGCATCATG
GACCACATGG AGCGCGGCTA CCTGAAGCTC GACGAATTGA ACACGCTGGT CCTTGACGAA
GCCGACCGCA TGCTCGACAT GGGCTTCCAT GATGACATTG CTTACGTCGC CAAGCGGTGC
CCGGCGCAGC GCCAGACGCT GTTGTTCTCG GCGACCTATC CGGAAGGCAT CGCCCTGCTG
GCCAGGCAGT TTTTGCGTCA GCCCAAGGAA GTCAAACTCC TTGAGCTGCA TGAGGAAACC
AAGATTCGCC AGCGCTTTTA CGAGGTCAAG GACGACGAGC GCCTCGATGC CGTGGTGCGC
CTGCTCAAGC ATTACCGTCC GGTCAGCACG CTGGCGTTCT GCAATACCAA GCAGCAGTGT
CGTGATCTGG TCAATGTCCT GCGCCACGCC GGCATTCATG CGCTGACGCT GAATGGCGAT
CTGGAGCAAC GCGAGCGCGA TCAGGTGCTG ATCCAGTTCG CCAACCGCAG TTGCTCGGTG
CTGGTGGCGA CCGACGTTGC GGCGCGCGGC CTGGATATCG ATCAGCTTGA AGCGGTGATC
AATGTTGATG TGACACCCGA TCCGGAAATC CACATCCACC GTATCGGCCG GACCGGCCGT
GGTGATGAAG AGGGCTGGGC GTTGAGTCTG TGCAGTTCCG GCGACCGCCG CCGGGTGGCG
ACGATCGCCG AGATGATGAA GTGCAAGCTC GACGTGCTTG ATCTGAAAAC CGTGGAAGTC
ACCGACGATT CGCCGCTGGT GCCGCCGATG TCGACATTGC TGATGCTCGG CGGGCGCAAG
GACAAGATTC GTCCCGGCGA CGTGATGGGC GCGCTGGCTG GCGAGGCTGG CCTGACCCGC
GAGCAGGTCG GCAAGATCAC GGTAACTGAC CAGAGCACCT ATGTGGCCGT AGCGCGTGCT
GTGGCCAAGG AGACGGTGCG CAAGCTGTCG GCCGGCAAGG TCAAGGGCAA GACGGTCAAG
GTTCGCATCC TGACCAATTG A
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| Protein sequence | MSEDTTAGQS FDTLPLSPAM LANLAQLEYL SMTPIQAASL PLALAGNDLI AQAKTGSGKT
AAFGLALLNR LNTSRFAVQA MVLCPTRELA DQVTQEIRRL ARFEENIKVL SLVGGSTLRN
QANSLEKGVH IVVGTPGRIM DHMERGYLKL DELNTLVLDE ADRMLDMGFH DDIAYVAKRC
PAQRQTLLFS ATYPEGIALL ARQFLRQPKE VKLLELHEET KIRQRFYEVK DDERLDAVVR
LLKHYRPVST LAFCNTKQQC RDLVNVLRHA GIHALTLNGD LEQRERDQVL IQFANRSCSV
LVATDVAARG LDIDQLEAVI NVDVTPDPEI HIHRIGRTGR GDEEGWALSL CSSGDRRRVA
TIAEMMKCKL DVLDLKTVEV TDDSPLVPPM STLLMLGGRK DKIRPGDVMG ALAGEAGLTR
EQVGKITVTD QSTYVAVARA VAKETVRKLS AGKVKGKTVK VRILTN
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