Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1127 |
Symbol | |
ID | 3570145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1232979 |
End bp | 1234889 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637679594 |
Product | heat shock protein 90 |
Protein accession | YP_284353 |
Protein GI | 71906766 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0326] Molecular chaperone, HSP90 family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 0.618251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGAGT CTGCAACCGC GAATGCGAAT CGCGAAACCC TGGGTTTCCA GGCTGAAGTA AAGCAACTGC TGCAATTGAT GATCCACTCC TTGTACAGCA ACAAGGAGAT TTTCCTGCGT GAACTGGTTT CCAACGCGTC CGATGCCTGC GACAAGCTGC GTTTCGAGGC GCTGAACAAT AGCGCGCTCT ATGGCGATGA TTCCGAATTG AAGATTCGCA TTGCCTTCGA CAAAGACGCT CGTACGATCA CCATTTCCGA CAACGGCATT GGCTTGTCGC GTGATGAGGC GGTTGAGCAT CTCGGCACCA TCGCGAAGTC CGGTACCAAG GAGTTTTTCT CGGCACTGAC CGGTGATCAG GCCAAGGATG CCCACCTGAT CGGGCAGTTC GGCGTCGGCT TCTACTCATC ATTCATCATT GCCGACAAGG TCACGGTGGT TTCCCGCCGC GCTGGTGTCG AGGCCAATCA GGCCGTTTGC TGGGAATCCG GTGGCGAGGG GGATTACACC GTCGAAATGG TCGAGAAGGC CACGCGTGGT ACTGATGTCA CCTTGCATCT GCGCGAAGGC GAGGATGAAT TCCTCGGTGG CTGGAAGCTG AAATCGATCA TTCGCAAGTA CTCCGATCAC ATCACCTTGC CTATCGTGAT GAAAAAGGAG GACTGGAAGG ACGGCGAGCA GGTGATGACC GAGGAAGACG AGACCGTCAA CCAGGCCAAT GCGCTGTGGG TTCGCTCGAA GTCCGACATT ACCGAGGAGC AGTACAAGGA GTTCTACAAG CACGTCGCAC ACGACTTCGA GGATCCGCTG GCGTGGACGC ATGCCCGTGT CGAAGGCAAG CAGGAATACA CGCAGTTGCT CTACATTCCG GCTCGTGCGC CGTTTGACCT GTGGGACCGC AATGCCCGTC ACGGCATCAA GCTCTATGTG CGCCGCGTCT TCATCATGGA CGATGCCGAA CAACTAATGC CGCTCTACAT GCGTTTCGTG CGCGGGGTGG TCGATTCGTC CGATCTGCCG CTCAACGTCT CTCGTGAAAT CCTGCAGCAG AGCAAGGATA TCGACGGCAT CCGCAGCGGT TGTACGCGCA AGGTGCTGGG CATGCTGGAA GACCTGGCCG AGAACGACAA GGAGAAATAC GCCAAGTTCT GGGAAGCCTT TGGCTCTGTG CTCAAGGAAG GTGTTGGCGA GGATCATGCC AACAAGGAAA AGATCGCCGG CCTGATCCGT TTCTCCTCAA CGCACAACGA TACGGCGGAG CAAAATGTTT CGTTGGCTGA CTACATCGGC CGCATGAAGG AAGGCCAGGA GAAGATTTAC TTCGTCACCG CCGACACCTT CAATGCTGCC AAGAATAGTC CGCATCTTGA GATCTTCCGC AAGAAGGGTA TCGAAGTGCT GCTGCTGTCT GATCGTGTCG ACGAGTGGGT GGTTGGGCAC CTGACCGAGT TCGACGGCAA GCACCTGCAA TCGGTCGCCA AGGGCGGTCT TGATCTGGGC AAGCTGGAAG ATGAAGCCGA GAAGCAGGAA GCCGAAAAGG CTGCTGATGA CTACAAGGAA CTGCTCGAGA AGGTGAAAAC CTCGCTCGGC GACAAGGTCA AGGATGTTCG CGTAACTTAT CGCCTGACCG ATTCGCCGTC CTGCCTGGTG TCTGACGAGC ATGACCCGTC CGGCAATCTG GCCCGCCTGA TGAAGGCGGC TGGTCAGCCA ATGCCGAACT CGAAGCCTAT CCTCGAAATC AACCCGCAGC ACCCGGCGGT GATGCGCTTG AAGTACGAGG AAAGCCGTTT CGACGACTGG GCGGCGCTGC TGTTCGAACA GGCAACCCTG GCGGAAGGTG GCCAACTCGA CGATCCGGCT GGCTTCGTGA AGCGCATCAA CGATCTGATG ATGGCGCTGT CAGCGAAGTA A
|
Protein sequence | MSESATANAN RETLGFQAEV KQLLQLMIHS LYSNKEIFLR ELVSNASDAC DKLRFEALNN SALYGDDSEL KIRIAFDKDA RTITISDNGI GLSRDEAVEH LGTIAKSGTK EFFSALTGDQ AKDAHLIGQF GVGFYSSFII ADKVTVVSRR AGVEANQAVC WESGGEGDYT VEMVEKATRG TDVTLHLREG EDEFLGGWKL KSIIRKYSDH ITLPIVMKKE DWKDGEQVMT EEDETVNQAN ALWVRSKSDI TEEQYKEFYK HVAHDFEDPL AWTHARVEGK QEYTQLLYIP ARAPFDLWDR NARHGIKLYV RRVFIMDDAE QLMPLYMRFV RGVVDSSDLP LNVSREILQQ SKDIDGIRSG CTRKVLGMLE DLAENDKEKY AKFWEAFGSV LKEGVGEDHA NKEKIAGLIR FSSTHNDTAE QNVSLADYIG RMKEGQEKIY FVTADTFNAA KNSPHLEIFR KKGIEVLLLS DRVDEWVVGH LTEFDGKHLQ SVAKGGLDLG KLEDEAEKQE AEKAADDYKE LLEKVKTSLG DKVKDVRVTY RLTDSPSCLV SDEHDPSGNL ARLMKAAGQP MPNSKPILEI NPQHPAVMRL KYEESRFDDW AALLFEQATL AEGGQLDDPA GFVKRINDLM MALSAK
|
| |