Gene Daro_1126 details

Gene Information

• Locus tag: Daro_1126
• Symbol: greB
• ID: 3570021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dechloromonas aromatica RCB
• Kingdom: Bacteria
• Replicon accession: NC_007298
• Strand: +
• Start bp: 1226825
• End bp: 1227382
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 637679588
• Product: transcription elongation factor GreB
• Protein accession: YP_284352
• Protein GI: 71906765
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01461] transcription elongation factor GreB

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1.19101e-20
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.833179
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATAAGG CCTTCGTGCG GGAGAGTGAA GGCGATGACG ACGAAGAGCT TGAGCCATCG 
CTAAAGCTCC CGGCGGGGAC ACGCAATTAC ATTACGCCGG CTGGGCATGA TCGGCTGAAG 
AGTGAGTTGG AGCATCTCGT CAAACGGGAG CGGCCGCATG TGGTTGAGAT TGTTTCGTGG 
GCGGCATCCA ATGGCGACCG CTCCGAAAAT GGTGACTATA TATATGGGAA GCGGCGATTG 
CGTGAAATCG ATCGCCGTAT CCGCTTCCTG ACCAAGCGTC TGGATGTTGC TGAAGTAATT 
GATCCTCTGC GTCAGGGGGA TAACGATCAG ATTTTCTTTG GCGCCACGGT GACCATTGCT 
GGCATAAACG GTGTTGCAAA CACTTATACG ATTGTTGGTG TGGATGAAAC CGATGTCTCA 
AGAGGGCGGA TCAGTTGGAT ATCGCCTCTG GCGCGCGCGC TGATAAAGTC CCGGGAGGGT 
GATTCCATTC GTTTTCAAAG CCCGCTCGGT GTTCGGGAAA TAGATATCCT TGAAGTTGTT 
TATCAGGTAA TTGACTGA 

 

Protein sequence

MNKAFVRESE GDDDEELEPS LKLPAGTRNY ITPAGHDRLK SELEHLVKRE RPHVVEIVSW 
AASNGDRSEN GDYIYGKRRL REIDRRIRFL TKRLDVAEVI DPLRQGDNDQ IFFGATVTIA 
GINGVANTYT IVGVDETDVS RGRISWISPL ARALIKSREG DSIRFQSPLG VREIDILEVV 
YQVID