Gene Daro_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1122 
Symbol 
ID3570017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1224425 
End bp1225063 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content54% 
IMG OID637679584 
Producthypothetical protein 
Protein accessionYP_284348 
Protein GI71906761 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.000000112514 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGTC GTTTGATGCC CAAAGAGGGC AAGTATTTCG ATCTTTTCAA CTCGCACGCC 
GTGTTGATTG CAGAAGGCGG GAAGGCTCTG TCCAACCTGA TTGCCGCGCT CGTTGATCAG
CCGGAACTGG CTGACAAGTT TGCCGAGGAA ATTGATACCC TCGAGCGCAA GGCGGATGCC
ATTACCCATG ACACGCTGTC GCAACTGCAT ACCTCCTTCA TCACGCCGTT TGATCGCGAT
GAAATTCATC AGCTGATCAA CGGCATGGAT GACATTCTGG ATATCATGCA GGATGTGGCC
GAGTCCATCT CGCTTTACGA TATCCGTCGC GTTCCGGAAG ATGCCAAGGC CATGGCGGTG
GTGACCGAAA ACTGCTGCGT TTGCGTGCAG TCCGTCGTCA AGTTGCTGCA TAGCATGGAT
AACGCGCCAG CCATTCTCAA GTTCTGTCAT CAAATCGATG AGCTCGAGTC TGAGGCTGAT
CGTTCGTTGC GCGGTGCCAT GTCAAAAGTC TTCCGCGAAG AGCCGGATGC GCGTGAAGTG
ATCAAGCTCA AGGAAATTTA CGAACTGCTC GAGTCGGTCA CCGATCGCTG CAAGGACGTG
GCCGGCACGA TCGAAGCCAT TGTTCTCGAA AACTCCTGA
 
Protein sequence
MFGRLMPKEG KYFDLFNSHA VLIAEGGKAL SNLIAALVDQ PELADKFAEE IDTLERKADA 
ITHDTLSQLH TSFITPFDRD EIHQLINGMD DILDIMQDVA ESISLYDIRR VPEDAKAMAV
VTENCCVCVQ SVVKLLHSMD NAPAILKFCH QIDELESEAD RSLRGAMSKV FREEPDAREV
IKLKEIYELL ESVTDRCKDV AGTIEAIVLE NS