Gene Daro_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1110 
Symbol 
ID3569383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1214014 
End bp1214817 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content66% 
IMG OID637679572 
ProductIron permease FTR1 
Protein accessionYP_284336 
Protein GI71906749 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0672] High-affinity Fe2+/Pb2+ permease 
TIGRFAM ID[TIGR00145] FTR1 family protein 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.605403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.299295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAACG CATTTTTTGT CGTCTGGCGC GAGAGCCTCG AAGCCTTCCT GATCGCCGGC 
ATCCTTTACG CTTGGCTCAA GGCCAATGAC GACAGCGGCA GCGGCAAGCG CGCACTGTTT
CTCGGACTGG CAGCCGGTGT CGGGCTGGCG CTGCTTCTCG GCTGGGCGCT GCTCGGCGTG
CAGGACGGAC TGAGCGGCGA TGCGCTGGAA ATCTTCCAGA CTGCAACGCT GTTCGTCGCC
GCCGGACTGA TTACCCAGAT GGTGCTGTGG ATGAAGAAAA ATGGCCGGCA GATGAAGGCC
ATGCTGCATG CCGAACTGAG CAGCGCGGCC GAACGTTCCG GTCACCTCGG CGTCGCCGTG
GTGGCGGCAC TGGCCGTGGC CCGCGAAGGG GCCGAAACGG TCATCTTCCT CTACGGACTG
GCCCAGGGCG GCGAAATGCA GGCGCTGGCC TTTGGCTGCT TCTTCGGCCT TGCCGCCGCC
GGGCTGACCG CCTGGCTGGC GGCACGCAGC CTGGCCAAAC TCAACATTGC CCTGCTGCTC
CGCCTGTCGT CCATCCTGCT GCTCGTCCTG GCTTCAGCCC TGCTCCTTTC CGGCATCGAC
CGGATGATCG GTGCCGGCTG GCTGCCGCCA CTGCTCGACC CGGTGTGGGA TACCTCCATG
CTGCTCGACG ACACCACCAA GGGCGGCAAG ATTCTGGCCG ATTTCACCGG CTACCGCGCC
CGCCCGGCCC TCAGCGATCT GCTCGCCTGG GCCTGCTACT GGGGGGTTGT CATCGTCGCC
CAACGGAGAA TCGCCCGTGG CTGA
 
Protein sequence
MGNAFFVVWR ESLEAFLIAG ILYAWLKAND DSGSGKRALF LGLAAGVGLA LLLGWALLGV 
QDGLSGDALE IFQTATLFVA AGLITQMVLW MKKNGRQMKA MLHAELSSAA ERSGHLGVAV
VAALAVAREG AETVIFLYGL AQGGEMQALA FGCFFGLAAA GLTAWLAARS LAKLNIALLL
RLSSILLLVL ASALLLSGID RMIGAGWLPP LLDPVWDTSM LLDDTTKGGK ILADFTGYRA
RPALSDLLAW ACYWGVVIVA QRRIARG