Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1100 |
Symbol | |
ID | 3569373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1203131 |
End bp | 1203715 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637679562 |
Product | TetR family transcriptional regulator |
Protein accession | YP_284326 |
Protein GI | 71906739 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 0.0669836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.61487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATC GTCACGACAA TACCCGCCAG CACATTCTCG AAACCGGCCA CCGCATCATC GCGGGCAAGG GCTTCGCGAG CGTCGGGCTG AACGAAATCC TCACTTCGGC CGGCGTGCCC AAGGGTTCGT TCTACCACTA CTTCGAATCC AAGGAACAAT ACGGCCAGGC TTTGCTGCAG GAGTATTTCG ACCATTACCT GGCCGATCTC GACGAACTGT TCGCCGCCGA TGCCGCCTCC GGGCACGAGC GCCTGATACG CTACTGGCAG CGCTGGCTGG GCAAGCAACT CGAGGCCTGT GCCGAGCAGA AATGTCTGGT CGTCAAGCTG GCCGGCGAAG TGTCCGACCT CTCCGATGCC ATGCGCATCA CCCTGCGCGA CGGCACGGAC CAGATCGTCA AGCGCATCGC CCGCATCATC GAAGCCGGTG TTGCCGATGG CTCGGTGCCG CCGCTCGACC CGCAGATGAC CGCCCAGACC CTGTACCAGA TGTGGCTGGG CGCCAGCCTG CTTGGCAAGT TGCACCGCGA CACCGCGGCG CTGGAAAACG CCATGGTCTT CACCCGAAAA CTGCTGTCCC GCTAA
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Protein sequence | MNNRHDNTRQ HILETGHRII AGKGFASVGL NEILTSAGVP KGSFYHYFES KEQYGQALLQ EYFDHYLADL DELFAADAAS GHERLIRYWQ RWLGKQLEAC AEQKCLVVKL AGEVSDLSDA MRITLRDGTD QIVKRIARII EAGVADGSVP PLDPQMTAQT LYQMWLGASL LGKLHRDTAA LENAMVFTRK LLSR
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