Gene Daro_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1074 
Symbol 
ID3568140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1177982 
End bp1178767 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID637679536 
ProductNUDIX hydrolase 
Protein accessionYP_284300 
Protein GI71906713 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAA CCAGTTACTG GATTCTGCGC TCCGAACATC GCCTGCTGAC GATCACCGGC 
CATGGGGCGG AGGCGATTTT CCCGTCTGCC CTGCCAGCCG ATTTCAAGCA TCCGGCCAAC
GCACTTCCTG TCGGACAACT CAACGGATGC CCATGCTATG CCGCCGATGT CGAGCATCTG
CCGGCCATCC CCGGCAGCGA GCCAACGCCG TTGCGCACCA TCTTCCAGCT GGCCGGAGCC
GAAACCTTCG CGCTGGCCGG TCGCGCCACG CAATTGCTGG ACTGGCAGAA CAACCACCGT
TTCTGCGGCA AATGCGGGAC GCCAACAGCC ATGAAAACCG GCGAGCAGGC CATGCAATGC
CCGGCCTGCG GACTACTGGC CTATCCACGC ATCTCCCCGG CGGTGATGGT GCTGGTGCGC
GATGGCGACA AACTGCTGCT CGGCCGTAGC CCGCACTTCA AGCCGGGCGT CTTCAGCGCC
CTGGCCGGTT TTGTCGAACC CGGCGAAACG CTGGAGGAAT GCGCCGCCCG CGAGGTTCGT
GAGGAAGTCG GCATCGAGAT CGCCAACCTC CGCTATTTCC ACAGCCAGCC CTGGCCTTTC
CCCAACTCGC TGATGGTCGC CTTCTTCGCC GACTACGCCG GCGGCACGAT CACGCCGGAT
CCGAACGAGA TCGAGGCCGC CGACTGGTTC CCGCTCGATG CCCTGCCCCT TCTGCCGGAG
CCGATCAGCA TCTCGCGACG ATTGATCGAT ACAGCCCGAA AACAGACCGA TAACGCTAAT
AACTAA
 
Protein sequence
MTQTSYWILR SEHRLLTITG HGAEAIFPSA LPADFKHPAN ALPVGQLNGC PCYAADVEHL 
PAIPGSEPTP LRTIFQLAGA ETFALAGRAT QLLDWQNNHR FCGKCGTPTA MKTGEQAMQC
PACGLLAYPR ISPAVMVLVR DGDKLLLGRS PHFKPGVFSA LAGFVEPGET LEECAAREVR
EEVGIEIANL RYFHSQPWPF PNSLMVAFFA DYAGGTITPD PNEIEAADWF PLDALPLLPE
PISISRRLID TARKQTDNAN N