Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1055 |
Symbol | |
ID | 3568121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1157324 |
End bp | 1159486 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637679517 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_284281 |
Protein GI | 71906694 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAAAA GAATCTTGCC GGGGCAAAAG ACCCGGATTG CCTGCCCTGC CGTTTTCGCC AAACGCTCGA TGGCGCGCCG CAGTAGGTTT TTGCCGCTGG GGGCGGCCGT CGTTGCAGGT TTGCTGGGCG CTGCGGATGG GGCGTTTGCC GAAGAAGACA AGACCTTGTC TGCGGTAACG GTGACGGCAA CCCAGGATGG GCCGGATGGC TACCGCGCCA CGAAGACCCG CGTCGGCAAG GTGGTGCAGG ATCCGCATGA CGTCCCTCAG GCCATCACCA CGGTGACCCG GGCGCTGATC GAGGAGCAGG AAGCCAACTC CCTGCGCGAA GCACTGCGCA ACGTTTCCGG TCTCAGCTTC AACGCTGCCG AGGGCGGTCG TTCTGGCGAC AACATGAATC TGCGCGGTTT TTATACCTTT GGCGACATGT ATCTCGACGG TATTCGCGAT ACGGCCCAGT ACAACCGCGA ACTGTTCAAC CTCGAGCAGG TCGATGTGTT GCGCGGTGCA GCGGCCATGC TGTTCGGGCG CGGCCAGGCA GGGGGCGTGA TCAATCAGGT CAGCAAGACG CCGATGCTGT ACGGCATCAA CAAGGTCGGC ATCGGTATCG GCACCGATGG CTTCCAGGAG GTGAAGGCCG ACCTGAACCA GCGGGTCGGC GATACCACGG CCTTCCGTAT CAACGTGATG AATCGCGATG AAGGCAGTGC GCGCAGCAAT CCCTATACCG GCACTGAACC GGAAATCCAT CGCATGGGCT TCGCACCGAG CGTTTCGTTC GGACTGGGGA CCAACCACGA AGTCACGCTG AGCCATTTGT GGGTCAAAAC GCAGGATCGC GCCGATTACG GCGTTCCTTT CGTGAATCGC AAGCCCAACG AGGATATGGC GAAAGCCGGA AACTATTACG GCGTCGATGC CAACTTCGAC GACAGTGAGA CGAATATCTC CACCTTGAAT TACCTGTTCA AGATTTCGCC GGATACCCAG TGGCGAACTG TGATGCGGGC GGCCAACTAC AAGCGTTCCT ACTGGGCGGT GGCCGGGCAG GGCGTCCTGA CCGCGAACAG CACGGCGGGA CAAGCCAAAA CCCGTGAGTT CGAGACCGAT AATTACGTGT TGCAGAGCGA TCTGAACACG GCCTTTACGC TGTTCGGCCT GAAGAACGAA CTGATCACCG GTGTCGAATA CCTCAACGAG GATTCGATCC GCTGGGCGCT GCGCAATCTG GGTACGGCCA ACAACCCACT GTACAAGCCG GGTCAATATA CGACGGCGGC GCCGGCTACC TACAAGGGCG AAACCTACAG CGCCTACGTG CAGGATAGCC TCGAGTTCAT TCCGGACTGG AAGATGACGC TCGGCATCCG CCGCGACATC ATGCAGTCCG AATACTTCAC GACGACGGCC TTTAGCGGCA ATTTTGCCGA GAACAGCTAC CGGGCTGGCC TGTCCTGGCA ACCGACCGCG GCGCAGCACT ACTACGCCGG GTGGAGCGAT TCGTTCAGCC CGACGGCCGA TCTTTATCAG TTGTCCGGTA ACCAGTATCC GGCCGAGCGA TCGAAGGTGT TCGAGCTGGG CAGCAAGTGG CTGCTGGCCG ATGGCAACCT CTCCCTGCGC ACTTCGCTCT ACCGCGCCAT CAAGGATTGG GAACGCAATA CCGACCTCGA ATCGACGGCG ACCATCCTGA CCCGCAAGCG GCAGTCGGAC GGTGTCGAAC TCGAAGTGGC CGGCCGGATT ACCGACAACT GGGAAGTGTT CAGCGGCCTG TCGCTGATAC ATGCAGAGAT TCTTGAAGTG GCGCCGGGCA ACGGCAATGT GAATTTCATC GGCCAGATGC CGCGCAATAC GCCGAAGAAG ACCTTCAACC TGTGGTCGAC CTACCAGTTG CCCTATGGCT TCAAAGTTGG TGGCGGCATG GAGTACAAGA GCCAGCGTTA CGGCGGGGCG CCGACCGGTA CGGCGGTTTT CAACCCGAAC TGGGTGCCGT CCTATACCCG CTGGGATGCG ATGGTCTCCT ACGACCAGCC CAAGTACACG GTCAAGTTCA ACGTCCAGAA CATTTTCGAC AAGCTGTATT ACGACGCCCT GTATGACAAC GGCGGTTTTA CCGTGCCCGG CCAGGCACGC CGTTTCATCC TGAGCACCGA GTACAAATTC TGA
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Protein sequence | MKKRILPGQK TRIACPAVFA KRSMARRSRF LPLGAAVVAG LLGAADGAFA EEDKTLSAVT VTATQDGPDG YRATKTRVGK VVQDPHDVPQ AITTVTRALI EEQEANSLRE ALRNVSGLSF NAAEGGRSGD NMNLRGFYTF GDMYLDGIRD TAQYNRELFN LEQVDVLRGA AAMLFGRGQA GGVINQVSKT PMLYGINKVG IGIGTDGFQE VKADLNQRVG DTTAFRINVM NRDEGSARSN PYTGTEPEIH RMGFAPSVSF GLGTNHEVTL SHLWVKTQDR ADYGVPFVNR KPNEDMAKAG NYYGVDANFD DSETNISTLN YLFKISPDTQ WRTVMRAANY KRSYWAVAGQ GVLTANSTAG QAKTREFETD NYVLQSDLNT AFTLFGLKNE LITGVEYLNE DSIRWALRNL GTANNPLYKP GQYTTAAPAT YKGETYSAYV QDSLEFIPDW KMTLGIRRDI MQSEYFTTTA FSGNFAENSY RAGLSWQPTA AQHYYAGWSD SFSPTADLYQ LSGNQYPAER SKVFELGSKW LLADGNLSLR TSLYRAIKDW ERNTDLESTA TILTRKRQSD GVELEVAGRI TDNWEVFSGL SLIHAEILEV APGNGNVNFI GQMPRNTPKK TFNLWSTYQL PYGFKVGGGM EYKSQRYGGA PTGTAVFNPN WVPSYTRWDA MVSYDQPKYT VKFNVQNIFD KLYYDALYDN GGFTVPGQAR RFILSTEYKF
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