| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1017 |
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| Symbol | |
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| ID | 3568442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1113392 |
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| End bp | 1115431 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637679476 |
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| Product | helix-turn-helix, Fis-type |
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| Protein accession | YP_284243 |
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| Protein GI | 71906656 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTTTTCC ATAAATACCC CGGAGCCCGC CACGAGCCCA ATGTGACTGC CAACAGCAAT
TTTCTTATTC CACGAATCGG CGACGAGTCG GCTGTAGCCC GTTCATGGGA ACGATTCCTT
GAGAACCGGC CATTGCCCGG TGTTGGCGTG CGCAATGTGG TACTCGACTC CTGGCGGCGC
AGCCGTTCGG AGTCCGTCGA TCCAGGCATC GGCAGTGCCC CGACGGCTAA TGGCGACAAG
ATTCACCAGT TGCGGGCGCG CTCCCATGAT CTATATGAGG CGGCCAAGCC GGTGCTCGAA
ACCCTGCGCG AAATCCTGCG CGAATCAGGC ACACTGATCA TGCTCAGTGA CCCAAGCGGG
ACCATTCTCG ACCTCAATGG CGAATCCCGC GCCCGCGATG CGGGCGAGCA GATCAACCTG
GCACCAGGCG GTTGCTGGAG CGAAGACCTG ATCGGCACCA ATGCCATCGG TACGACCATT
GCCACGCATC AGGCCGTGCA AATCTACGCC AGCGAACACT ACTGCATCGA TGTCAAGCAC
TGGACCTGTG CCGCTGCCCC CATCCTCGAC CCGCTGGGCA GGAACCTGCT CGGCGTCGTC
GATGTTTCCG GCGTCAAGGA GACCTTTCAC GGACATACGC TGGGCCTGGT CATCTCGGCG
GCCAAACAGA TCGAAGGCAT CCTGGCCCGC CGCGACGCGG AACAGCATGG CCGTCTGCTC
GAACACGCCA CGGACAGTTT CAGCCGTTAT GGCAACGATT GTGTGGTGTT GTTTGATCAG
CGCGGTCGTA TCGTCAAGAC CTGCGGCTGC ATGCAACAGG CCCGCAAGAT GTACGGTGTG
CGCCTGCCTT TCGAGGTTGG CAGCCAGGTC ACCGCCCTCG ACTTCGCCGT GCATCCCGAC
GAGCGCCTGA GCCAGACGCC GCTCTGGCTA CGCCCGGAAT GGCTGCACCC GGTACGTTCC
CGCGATGGTG ACCTCGGCAC CCTGCTGGTC ATCCCCATCG GCACATCGGC ACGACAATCA
GTCAGCATCC CGCCCCCGGC GACCAGGACG ACGGATGAGG TCTTCGCTGA AATCATCGGC
ACCAGCCAGG CCATTTCGAC AGCAAAAGCC CGCGCCAAAA GAATCGCACC ACTCGATCTG
CCCGTCCTCT TGCTCGGTGA AACCGGCGCC GGCAAGGAGG TTTTCGCGCG CGCCATCCAC
AAGGCGAGCA GCAAACCGGA AGGGCCTTTC ATCGCTGTCA ATTGCGGCGC CCTGACCCGC
GAACTGCTGG CCAGCGAATT GTTCGGCTAT AGCGAAGGCG CATTTACCGG CGCCCGTCGC
GGTGGGCTGC CCGGCAAGTT CGAACAGGCT GACGGCGGCA CCCTGTTTCT CGATGAAATC
GGCGAAATGC CGCTCGACAT GCAACCTCAT CTGCTACGTG TGCTGCAGGA CGGCGTGGTC
GTCCGGCTCG GCGACACCAA GGAACGCAAA GTGGCAGTGC GCATCATTGC CGCGACCAAT
CGCGACCTGC AAGCGGATTC CAGCACCGGC CGTTTCCGCG AAGATCTTTT CCACCGGCTC
TGCGTCGTCA GCCTGCTCCT GCCGCCCTTG CGCGAGCGCC CAGAGGATAC CGAAGCGATC
ATCGGCCATC TCAACCAGCG CTTGGCCCGC AAATACGGCT GCCCGCCGAA GAGCCTGGCC
CCCGAAGTCC TGCACCATCT GCTGCGCTAT CGCTGGCCGG GAAATATCCG CGAATTGCAA
AATGTGTTCG AAGCCATGTT TGCGCTAAGC GATAGCAACC GCATCGATGG CAGCCTGCTC
CCGCCGCATA TAGCCGCTGC CGCAGTCGAT GCGGTGCTGG CGCGCGGTGA GGTAACGCAG
GCCATGGCAG CCGGTCGCCT GGCCGAAATG GAGCGGGCCG CAATCAATGC CGCCGTGGCC
AACAGCCACG GCAACCTGTC GATGGCGGCC CGAAACCTGG GGATTTCACG CAGCACGCTC
TACGTGAAGC TGGCCGCCAT GCGTGAGGTA CCGACAGCAG GATCGCTGTC GTTATCGTAG
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| Protein sequence | MFFHKYPGAR HEPNVTANSN FLIPRIGDES AVARSWERFL ENRPLPGVGV RNVVLDSWRR
SRSESVDPGI GSAPTANGDK IHQLRARSHD LYEAAKPVLE TLREILRESG TLIMLSDPSG
TILDLNGESR ARDAGEQINL APGGCWSEDL IGTNAIGTTI ATHQAVQIYA SEHYCIDVKH
WTCAAAPILD PLGRNLLGVV DVSGVKETFH GHTLGLVISA AKQIEGILAR RDAEQHGRLL
EHATDSFSRY GNDCVVLFDQ RGRIVKTCGC MQQARKMYGV RLPFEVGSQV TALDFAVHPD
ERLSQTPLWL RPEWLHPVRS RDGDLGTLLV IPIGTSARQS VSIPPPATRT TDEVFAEIIG
TSQAISTAKA RAKRIAPLDL PVLLLGETGA GKEVFARAIH KASSKPEGPF IAVNCGALTR
ELLASELFGY SEGAFTGARR GGLPGKFEQA DGGTLFLDEI GEMPLDMQPH LLRVLQDGVV
VRLGDTKERK VAVRIIAATN RDLQADSSTG RFREDLFHRL CVVSLLLPPL RERPEDTEAI
IGHLNQRLAR KYGCPPKSLA PEVLHHLLRY RWPGNIRELQ NVFEAMFALS DSNRIDGSLL
PPHIAAAAVD AVLARGEVTQ AMAAGRLAEM ERAAINAAVA NSHGNLSMAA RNLGISRSTL
YVKLAAMREV PTAGSLSLS
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