| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1016 |
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| Symbol | |
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| ID | 3568441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1110855 |
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| End bp | 1113191 |
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| Gene Length | 2337 bp |
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| Protein Length | 778 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637679475 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_284242 |
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| Protein GI | 71906655 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCTTAT TCTCAACAGC CGTCAATTTT CTTGCTTTAC CCTTTGCGAC AGCCAGTTAC
CGCAATGATT TGCGGCGCAC CCTCCTGGCG CTGAGCGCCG ATGCTGCCCT GATGCTGCTG
GTGCTGGTCA GCGCCATGCT GCTGACTGTT CTGCCCAGCC TGCCGGCATT CGATGTCGTG
ACCGACTATC GCCCGAAGAT TCCCTTGCGG ATTTATACGG CTGATGGCGC GCTGCTGGGG
GAGTTCGGCG ACGAACACCG GGACTTCACG CCGATCAAGG AAATCCCTCC GGTCTTGAAG
GATGCCCTGT TGTCGATCGA GGATGCGCGT TTCTACGAGC ACAGTGGCGT TGATTACCGA
GGCGTCCTGC GGGCGCTGGC GGCCGATCTG ACCGGCGGTT TCCGCCAGGG GGCCTCGACG
ATCACGATGC AGGTGGCACG TGCCTTCTTC CTGTCGCAGG AAAAAACCGT CAAGCGCAAA
TTGACCGAGG TGGTGCTGGC CTACCGCATC GAATCGGCGT TGAGCAAGGA CCAGATCCTA
GAGCTCTACA TGAACCAGAT CTACCTCGGA CAGCGCACAC ATGGCTTTGC CAGCGCGGCC
CGCACCTATT TCAACAAGCG CCTGCAGGAC CTGACCCTGG CGGAAGCGGC CATGCTGGCC
GGCATCCCGC AAAACCCGGC CAAGCGCAAT CCGGCGGTCA GTCCGGTCCG GGCCAAGGCA
CGCCAGGAAC TGGTGCTGAA GCGCATGCTG CAGCTGGGCA AGATCGATCA GGCGCAATAT
GCCGAGGCCG TCAGTCAGCC TCTCAAGATC AGCCGCAGCC TGCAGTTCGA GGCGCATGCC
GATCATGTCG CCGAGTTGGT GCGCCAGGAG CTCTATGCGC GATACAAGGG CGATGCCTAT
ACCCAGGGCT TCAAGGTCTA TACCACGCTC GACAAGGCCG AGCAGAACGC TGCCTACGAC
TCGGTCCGGC GCAATGTGCT GGCCTACGAC CAGCGCCACG GCTACCGCGG GCCGGAAGCT
TTTGTCGATC TGCCGGCGAA TGTGGACGAA CAGGATGAAG CCATCGACCG GATCCTGGCC
AGGCATCCCG CCAGCGACAA CCTGATCTCG GCCGTCGTCA CCGAAGTCTC GGCCAAGCTT
GTCAGGGCCG AACCCGCCTC CGGCGACACG ATCGAAATCA AGGGTGAGGG GCTGCGTTTC
GCCGCCCGCG CCCTGCAAGC GAACGCCAGC ATAAATCTCA AGATTCGGGT CGGTTCGGTG
ATCCGCGTCA GCCAGGACAG CAAGGGCCGG TGGGCTATCA GTCAGATGCC GGAAGTCGAT
GCCGCGTTCG TCGCCCTGAA TGCCGAGGAT GGCTCCTATC GGGCCATGGT CGGCGGCTTC
GATTTTGCCC GCAATCAGTT CAATCATGTC ACCAGCGCCT GGCGCCAGCC GGGATCGAGC
ATCAAGCCCT TCGTTTATTC GGCCGCGCTG GAAAAGGGGT TTTCGCCGGC CACCCTGATG
AACGATGCGC CGCTGTCGTT GCCCGGCGGT GAAAACGGCC AGGCCTGGGA GCCCCGCAAC
GACGACGGCT TCGATGGTCC GATCAGCCTG CGCCAGGCCT TGGCCCGCTC GAAGAACGTC
GTCGCGGTCC GCTTGCTGCA AGCCATCACG CCGCAATATG GGCGCGACTA CCTGCAACGC
TTCGGCTTCG ATGCCGCCAA ACATCCGGCC AACCTGACCA TGACGCTGGG CAGCGGCTCG
GTCACCCCGC TGCAGATGGC CTCTGCTTAC GCGGTATTTG CCAATGGCGG ATTCAGAGTC
ACCCCCCGGC TGATCCAGAA AATTACCGAC GCCCACGGCA CCGTGCTGTG GGAAGCACCG
CCGCCGCCGG CTCGGCAGGA GGAGCAACGG GCCATCGACC CCCGCAATGC CTTCATCATG
GACAGCATGC TGCGCGAGGT GGTCAGAAGC GGCACCGGCG CCCAGGCAAG CCAGCGCCTG
GGACGCAACG ATCTGGCGGG CAAGACCGGC ACCACCAGCA ACGCGGTCGA TGGCTGGTTT
GCCGGCTATG CGGGGAATGT CGTCGCGGTC TCATGGATGG GGCACGATCA GCCCAAATCG
CTCGGAGGTC GGGAATTCGG TGCAACGTTG GCGCTGCCGA TCTGGATCGA CTATATGCGC
CAAGCCTTGT CCGGCAAGCC GCCCAGCGAC AGAAAACCGC CACCGGGCGT CTCTTTCGTC
GATGGCGACT GGCTCTACGA TGAATTCAAG GGTGATGAGG GAGTCAAGGC TCTGGATGTG
GAGGTGTCAC CGCTCAACTC CATCTTTGAG ACGCTACGGA AGGCGTTCGG CGGCTGA
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| Protein sequence | MSLFSTAVNF LALPFATASY RNDLRRTLLA LSADAALMLL VLVSAMLLTV LPSLPAFDVV
TDYRPKIPLR IYTADGALLG EFGDEHRDFT PIKEIPPVLK DALLSIEDAR FYEHSGVDYR
GVLRALAADL TGGFRQGAST ITMQVARAFF LSQEKTVKRK LTEVVLAYRI ESALSKDQIL
ELYMNQIYLG QRTHGFASAA RTYFNKRLQD LTLAEAAMLA GIPQNPAKRN PAVSPVRAKA
RQELVLKRML QLGKIDQAQY AEAVSQPLKI SRSLQFEAHA DHVAELVRQE LYARYKGDAY
TQGFKVYTTL DKAEQNAAYD SVRRNVLAYD QRHGYRGPEA FVDLPANVDE QDEAIDRILA
RHPASDNLIS AVVTEVSAKL VRAEPASGDT IEIKGEGLRF AARALQANAS INLKIRVGSV
IRVSQDSKGR WAISQMPEVD AAFVALNAED GSYRAMVGGF DFARNQFNHV TSAWRQPGSS
IKPFVYSAAL EKGFSPATLM NDAPLSLPGG ENGQAWEPRN DDGFDGPISL RQALARSKNV
VAVRLLQAIT PQYGRDYLQR FGFDAAKHPA NLTMTLGSGS VTPLQMASAY AVFANGGFRV
TPRLIQKITD AHGTVLWEAP PPPARQEEQR AIDPRNAFIM DSMLREVVRS GTGAQASQRL
GRNDLAGKTG TTSNAVDGWF AGYAGNVVAV SWMGHDQPKS LGGREFGATL ALPIWIDYMR
QALSGKPPSD RKPPPGVSFV DGDWLYDEFK GDEGVKALDV EVSPLNSIFE TLRKAFGG
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