Gene Daro_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1015 
Symbol 
ID3568440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1109150 
End bp1110721 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content61% 
IMG OID637679474 
Productmajor facilitator transporter 
Protein accessionYP_284241 
Protein GI71906654 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCACC TGCAAGGCCG GTTCAGTCGC CACCGCTCGC TCATGCCACA GCGCTCAGGC 
AAAATAACCA AAAAGGCACT TGCCTCATCC GAGGCACCGT ATACTTTTTT ACCAGCCAAC
GAGCAGCCGA CAATTCCGAT GCGACGCCTC CGCCCAGCAA CAAGCTTTGA CACGCTTTCC
CAACGTTATG GGGAACGCTA CAAATGGATG GTGCTGTTCA TTCTCGCGCT GGGTACCGTG
GCCGGGGTTC TTTGCACCTC CAGCTTCAAT GTGGCCGTCC CGGCCCTCTC CCGGCACTTC
CGGCTTGGGC AGGACCAAGT GCAATGGGCC ATGACCGGAT TTCTGGCGGC GATGACCGTC
GGTATGCTGC CGACCTCGTG GTTACTCGAC CGCTTGGGCT TTCGCATTAT TTTCCTGCTT
TCCCTGGCCG TCCTGACACT GGCCAGCGTG GGTGGTTACT TTGCTCCCAG CTTTACGCTC
GTCGTCGCGG CCCGCATTCT GCAGGGCCTG GCTGCCGGGG TGCTGCAACC GATGGGCGCA
TTGGCGCTGA TGCGCCTCTT TCCGCCGGAG ATTCAGGGAA GAGCTTCCGG AATACTGATC
TTCAGTATCG CCCTGACCCC GGCCATCGCG CCCTCGTTGG GCGGCGCCTT GCTGGATCGC
TTTGGCTGGG AGTCCATTTT TCTGCTGGGC ACGCCATTCG CCGTCATTGC GGCGCTGTGC
GCCATTTATC TGTTACCGGC ACCACGGGAG ATCAAACGCA AGCCGTTCGA CTGGCTGGGG
CTGGGCTGGC TCACGCTGGG CGCCATCGCC CTGATCGAAA GCGTATCGAG TCTTCAACAC
AGCGGCCTGG CCTCGCCGTG GACAATGGGC CAGTTTGCCC TGGCTTTCGT CGCGTCGGCG
CTGTATTACC GGCACGCCAG GCTGCGCAGC GACCCGCTGA TCAACCTGGA TTTGTTTCGG
CAACGCACCT TCGCCATGGG AACGCTGGTC TCCTTTGCCT ATGGCTTTGG CCTGTACGCA
TCGACCTACC TGATTCCTGT CTTTCTCCAG AATGCCTTGT CGTTCAAGGC GGGTGCCGCC
GGCATGGCCT TGCTGCCTTC CGGGATCGCA CTCGTCGTGA TGCTGCCATT GGCCGGGCGC
ATGGCGGACC ATTACTCGCC CAAATGGATC ACCTTGATCG GACTCGTCGC CTTCGGTGCC
TCCTTCCTCA TTTTTTCCAT ACGGGGCGGC GCCATTCAGT ACGCCGAAAT CATCGCGGCC
ACCATCATCG GCCGCATCGG ACTCGGCATG ATTCTGCCGG CACTCAACCT CGCGACGCTG
CGTCACATGG AACCCCACCA ACTGGGTCAA TCCTCGGTCG TGACCAGCTA TGCCCGGCAA
TTGGGCGGTG TCATGGGAGT GGCGGTGCTG GCGGTCTTTG TCGAATGGCG CGAAACCGTT
TACGGCACAG TACCGCCGGG GATTTACTCG GCGTATTCCC AGGGCTTCCT GCTCCTCACC
GCCGTTTTTT CGCTTGCCGT GCTGGCAGCT TGTTTCATGA GGACAGAAGG TAGCCGTCCT
TCCCCAAAAT AA
 
Protein sequence
MAHLQGRFSR HRSLMPQRSG KITKKALASS EAPYTFLPAN EQPTIPMRRL RPATSFDTLS 
QRYGERYKWM VLFILALGTV AGVLCTSSFN VAVPALSRHF RLGQDQVQWA MTGFLAAMTV
GMLPTSWLLD RLGFRIIFLL SLAVLTLASV GGYFAPSFTL VVAARILQGL AAGVLQPMGA
LALMRLFPPE IQGRASGILI FSIALTPAIA PSLGGALLDR FGWESIFLLG TPFAVIAALC
AIYLLPAPRE IKRKPFDWLG LGWLTLGAIA LIESVSSLQH SGLASPWTMG QFALAFVASA
LYYRHARLRS DPLINLDLFR QRTFAMGTLV SFAYGFGLYA STYLIPVFLQ NALSFKAGAA
GMALLPSGIA LVVMLPLAGR MADHYSPKWI TLIGLVAFGA SFLIFSIRGG AIQYAEIIAA
TIIGRIGLGM ILPALNLATL RHMEPHQLGQ SSVVTSYARQ LGGVMGVAVL AVFVEWRETV
YGTVPPGIYS AYSQGFLLLT AVFSLAVLAA CFMRTEGSRP SPK