| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1000 |
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| Symbol | |
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| ID | 3569325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1092748 |
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| End bp | 1094733 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637679459 |
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| Product | helix-turn-helix, Fis-type |
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| Protein accession | YP_284226 |
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| Protein GI | 71906639 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA TTCAAATGCT GGCCGAAGTC CATGACCAGC GCCTGCAACA GGCAAGGCAA
CTATTCTTTG ATCAGGGCGG CTTGCCCGAG GGTCTGATCG ACCCGCTGAT TCTCCGTTCG
TGGGAGCGCT GTCGGCGCTT TGGTCTGGGC GAACTCAGCC TGACACCGGC CACCGAAGCA
ATGGATCGCG TCGCCCTGAA AACCGAACAG GATCGCAACC GTTATCTGCT GATGCAGGGC
CGGCCGATCA TGGAGCATGT CTTCGAGCAG ATTCGCGACT CGGGCAGCAT GGTCATCCTG
GCCGACGCCA ACGGCCTGCT GCTGGAAACC GTCGGCGACC CGGAATTCGT CAACCGGGCT
GATCGTGTCG CACTGTCCGC CGGCGCCTCG TGGGATGAAA ACCTGCGCGG CACCAATGCC
ATCGGCACCG CGCTTTCCGA AGAAGCCCCG GTCGCCGTCC TTGGCGGCGA ACACTTCATC
GAACACAACG GCTTCCTGAC CTGCTGCGCC AGCCCCATCT TCGGTCCGGA TGGGCGTCTG
ATCGGCGTCC TCGACATTTC CGGCGACTAC CGCAGCCATC AACGCCACAC GCTGGGCCTG
GTCCGCCTGT CCTCGGCCAT TGTCGAAAAG CGCCTGTTCG AATCGATTCA CGCCCGCGAC
ATCCTGGTCT GCTTCCATAG CCGCCCCGAC TATCTGGGCA GCCCGAAGGA AGGCATCGCC
GCCGTTTCGC CGGATGGTCA GGTACTGGCG ATCAATCGCA ACGGCACCGA GATTCTCGGC
ATCCGCCAGG TCGACGCCGT GCGCCGCGAT TTCTCCATGG TCTTCGAGAG CAACCTGTCC
GCCCTTGTCG ACCGTCTGCG CCACAACTCT CAGGGCACCT GCGAAATCAA TGTCAGCGGC
AAGGTCATCA ACGTCCAGCT GCGCGGTCAG TTGCCGCCGC TGGCCGTGGC CGGGCGTGTT
TTCGACGAGC CCCTGCCGCA ACGCGCGCCG CGCCGCGCCG AAACCGCGGC CGCACCAACG
CTGACGCTGG ACACCCTGAA CACCGGCGAC CCCCGCCTGC AGGCGGCCAT CGACCGCGCC
CGCCGCATGC TGGGTCGCGA CATCCCCATC CTGATCCAGG GCGAATCCGG CGCCGGCAAG
GAAATGTTCG CCAAGGGCTA CCACAACAGC GGCCCGCGTC GTGACCAGGC CTTCGTCGCG
CTCAACTGCG CCTCCATTCC GGAAACCCTG ATCGAATCGG AACTTTTCGG CTATCAGGGC
GGCGCCTTTA CCGGCGCCCG CAAGGAAGGC GCCCCGGGCA AGATTCAGCA GGCCCATGGC
GGCACGCTGT TCCTCGATGA AATCGGCGAC ATGCCGCTCA ACCTGCAGGC CCGCCTGCTA
CGCGTGCTGC AGGAACGCTG CGTGACACCT TTGGGCAGCA CACGTTCGAT CCAGGTCGAT
ATCTCGCTGG TCTGTGCCAC GCACCGCAAA CTACGCGAAG AAGTCGCCCG CGGCACCTTC
CGCGAAGATC TCTATTACCG CCTGAACGGC ATGAGCGTTA CCCTGCCCGC CCTGCGCGAA
CGAACCGACA TCCGTTCCAT GGTCGCCAAA CTGGCTGCTG TCGAAATCGC CGCACGTGGT
GGTCCGGTCA AGTTTTCCGA AGGCGCGCTG CAAGCTATCG AAGGGTACAG CTGGCCGGGC
AATATCCGCC AGCTGTTCAA CGTCATCCGC GTCGCCATTG CGCTACTCGA CGATGATGAA
ACCCTGATCA CCGAAAGCCA TCTGCCGGAA GAACTGTTCG AATCCTCCCC GCTCGCCGCG
ACCGCCAGCG TTCCAGCCTA CGACCCATGG GCCGCCGCAC CTCTCGAAGG CGCCAACAGC
ATGGATGCGA TCAGCCGCCA AGCTGCGATG CGAGCACTGG AAGCAGCCGG CGGCAACATT
TCGTCGGCGG CCCGCCAACT CGGCATCAGC CGCAACACGC TGTACCGCAA GCTGGGACGG
ATGTAG
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| Protein sequence | MGQIQMLAEV HDQRLQQARQ LFFDQGGLPE GLIDPLILRS WERCRRFGLG ELSLTPATEA
MDRVALKTEQ DRNRYLLMQG RPIMEHVFEQ IRDSGSMVIL ADANGLLLET VGDPEFVNRA
DRVALSAGAS WDENLRGTNA IGTALSEEAP VAVLGGEHFI EHNGFLTCCA SPIFGPDGRL
IGVLDISGDY RSHQRHTLGL VRLSSAIVEK RLFESIHARD ILVCFHSRPD YLGSPKEGIA
AVSPDGQVLA INRNGTEILG IRQVDAVRRD FSMVFESNLS ALVDRLRHNS QGTCEINVSG
KVINVQLRGQ LPPLAVAGRV FDEPLPQRAP RRAETAAAPT LTLDTLNTGD PRLQAAIDRA
RRMLGRDIPI LIQGESGAGK EMFAKGYHNS GPRRDQAFVA LNCASIPETL IESELFGYQG
GAFTGARKEG APGKIQQAHG GTLFLDEIGD MPLNLQARLL RVLQERCVTP LGSTRSIQVD
ISLVCATHRK LREEVARGTF REDLYYRLNG MSVTLPALRE RTDIRSMVAK LAAVEIAARG
GPVKFSEGAL QAIEGYSWPG NIRQLFNVIR VAIALLDDDE TLITESHLPE ELFESSPLAA
TASVPAYDPW AAAPLEGANS MDAISRQAAM RALEAAGGNI SSAARQLGIS RNTLYRKLGR
M
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