Gene Daro_0963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0963 
Symbol 
ID3570278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1043993 
End bp1044535 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content53% 
IMG OID637679422 
ProductNUDIX hydrolase 
Protein accessionYP_284189 
Protein GI71906602 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.000383094 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.278011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATG ATGCACACTT GATCGAATCG GAAGTCTCGA CCGAGACGGT TTTTGCGGGC 
GCCTTGCTCA ATGTACGCAA GGATTGTGTC CTTCTACCTA ATGGCAAGGA ATCAATCCGC
GAATACATTG TTCATCCCGG TGCTGTTGTC ATCCTGGCGT TCCTGGACAA TGGCAATCTG
CTGTTCGAGC GCCAGTACCG CTATCCGTTG CGTCGGGTCT TTCTCGAATT GCCGGCCGGC
AAGATCGATC ATGGTGAAGC CATCATCGAT ACGGCCCGGC GTGAACTGAA GGAAGAAACG
GGCTACGTTG CCAGTGAATG GGAATACCTT GGCATGATGC ATCCGTGCAT CGGCTACTCC
GATGAACGCA TAGAGATTTT CGCCGCTCGC GGCCTGCATC TGGCCGGTGA AAGGGAACTC
GATCACAACG AGTTTCTGGA TGTGATTGAA CTATCACCAG CCGAAGCAAA GCAGGCAGTT
TGGGATGGTC GCATCACTGA CGCCAAAAGC ATCACTTCCT TGTTCTGGCT GGATCGTCCC
TAG
 
Protein sequence
MSHDAHLIES EVSTETVFAG ALLNVRKDCV LLPNGKESIR EYIVHPGAVV ILAFLDNGNL 
LFERQYRYPL RRVFLELPAG KIDHGEAIID TARRELKEET GYVASEWEYL GMMHPCIGYS
DERIEIFAAR GLHLAGEREL DHNEFLDVIE LSPAEAKQAV WDGRITDAKS ITSLFWLDRP