| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0960 |
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| Symbol | |
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| ID | 3570275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1038861 |
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| End bp | 1040909 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637679419 |
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| Product | NADH-plastoquinone oxidoreductase, chain 5 |
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| Protein accession | YP_284186 |
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| Protein GI | 71906599 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.476185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.546603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC TCTATCTGCT CGTTCCCCTG GCTCCGTTGA TCGGTGCCAT GATCGCGGGC
TTGTTCTGCC GGGTCATTCC GCGCTGGGTG GCTCATACCG CTACCATCGC CGGTGTCGCC
ATTGCCTTCA TTACCTCAGT CATCATCTTC AAGGATGTCC AGGCTGGCCA CACCTACAAT
GGTGCGGTCT ATACCTGGCT GACCAGCGGT GACTACAAGT TCGAAGTCGG TTTCCTGATT
GATACGCTGA CCACCACGAT GATGCTGGTC GTCACCTTCG TGTCGTTGAT GGTCCATATC
TACACCATCG GCTACATGCA GGAAGACCCT GGCTATAACC GCTTCTTCAG CTACATCTCG
TTGTTTACCT TCTCCATGCT GATGCTGGTG ATGAGCAACA ACTTCATGCA GCTCTTCTTC
GGCTGGGAGG CAGTGGGTCT GGTCTCCTAC CTGCTGATCG GCTTCTGGTA CACCCGCCCG
ACGGCAATCT TTGCCAATAT GAAGGCCTTC TTGGTCAATC GTGTCGGTGA CTTCGGCTTC
ATCCTCGGCA TTGGCCTTGT GCTGGCCTAC TGCGGTTCGC TTGATTACGC AACGGTCTTC
GCGAAGGCAC CGACTCTTGC CGAAACCACG ATCAACCTGT TTGCAGGTCG CGAGTGGGCT
ACAGTTTCGT TGATGACCGC GACCTGTATC TGCCTGTTCA TCGGCGCTAT GGGCAAATCG
GCTCAGGTCC CGCTGCACGT CTGGCTGCCG GATTCGATGG AAGGCCCGAC CCCGATCTCC
GCACTGATCC ACGCTGCAAC GATGGTGACT GCAGGTATCT TCATGGTCGC CCGGATGTCG
CCGCTATTCG AATTGTCGAC CACTGCACTG TCCTTCGTCA TCGTAATCGG TGCCATTACC
GCGCTGTTCA TGGGCTTCCT GGGTATTATC CAGAACGACA TCAAGCGCGT TGTGGCCTAC
TCGACGCTGT CGCAGCTTGG GTACATGACT GTCGCGCTTG GCGCTTCCGC CTACTCTGTC
GCAATCTTCC ACCTGATGAC GCACGCCTTC TTCAAGGCGC TGCTGTTCCT CGGTGCCGGT
TCGGTGATTA TCGGCATGCA TCACGACCAG GACATCCGCA ACATGGGTGG TCTGCGCAAA
TATATGCCGA TTACCTGGAT TACTTCTCTG GTTGGTTCGC TGGCATTGAT TGGTACCCCG
TTCCTGTCTG GCTTCTACTC CAAGGACTCG ATCATTGAGG CTGCCCAAGT GGCCTATCAT
CATGGTCAGC CGGGGGCTGC ATTTGCTTAT TACGCAGTTC TGGCGGGTGT CTTCATCACG
GCTTTCTACT CTTTTCGCAT GTACTTCCTG GTCTTCCACG GCGAGGAACG TTTTGGCAAG
GCGGACGAAG CCCATCACCA TGAACATCAT GGCGACCACG ACGACGAGGA AGCTTCGCAC
GACCATCATC ACGGTCTGGC ACCGGGCCAA AAGCCACACG AAACGCCGTG GGTGGTCACT
TTGCCGCTGG TCTTGCTGGC TATCCCCTCA CTGTTGATTG GCTTCTTCGC GATTGAACCG
ATGCTGTACG GCGACTATTT CAAGGGTGTG ATCTTCATCA ATACGGAGGC CCATCCGGCC
ATGGAGCACT TGGCTGAAGA GTTCCACGGT GCTGTAGCCA TGGGCATGCA TTCGTTCACC
TCGTTGCCGT TCATTCTGGC GCTATCCGGT GTTGTGGTTT CGTGGTTCTT CTACATGAAG
CGCCCGGATA TTCCGGCAGC CATTCAGCGT CGTTTCTCGG CGATCCACAC TCTGTTCGAA
AACAAGTACT ACTTCGACAA GTTCAACGAA GTCGTATTCG CCGGGGGCGC CCGGATGCTC
GGCAAGGCGT TCTGGCGCGG CGGCGATGTA GCTGTTATTG ATGGTCTGAT CGTCAATGGT
TCAGCCAAGC TTGTTGGATG GATTTCATCC GTGACCCGCC TGTTCCAGAC CGGTTACGTT
TATCACTACG CTTTCACCAT GATCATTGGC GTCTTTGTGC TGATGACCCT GTGGATCAAC
CGCGCCTAG
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| Protein sequence | MQKLYLLVPL APLIGAMIAG LFCRVIPRWV AHTATIAGVA IAFITSVIIF KDVQAGHTYN
GAVYTWLTSG DYKFEVGFLI DTLTTTMMLV VTFVSLMVHI YTIGYMQEDP GYNRFFSYIS
LFTFSMLMLV MSNNFMQLFF GWEAVGLVSY LLIGFWYTRP TAIFANMKAF LVNRVGDFGF
ILGIGLVLAY CGSLDYATVF AKAPTLAETT INLFAGREWA TVSLMTATCI CLFIGAMGKS
AQVPLHVWLP DSMEGPTPIS ALIHAATMVT AGIFMVARMS PLFELSTTAL SFVIVIGAIT
ALFMGFLGII QNDIKRVVAY STLSQLGYMT VALGASAYSV AIFHLMTHAF FKALLFLGAG
SVIIGMHHDQ DIRNMGGLRK YMPITWITSL VGSLALIGTP FLSGFYSKDS IIEAAQVAYH
HGQPGAAFAY YAVLAGVFIT AFYSFRMYFL VFHGEERFGK ADEAHHHEHH GDHDDEEASH
DHHHGLAPGQ KPHETPWVVT LPLVLLAIPS LLIGFFAIEP MLYGDYFKGV IFINTEAHPA
MEHLAEEFHG AVAMGMHSFT SLPFILALSG VVVSWFFYMK RPDIPAAIQR RFSAIHTLFE
NKYYFDKFNE VVFAGGARML GKAFWRGGDV AVIDGLIVNG SAKLVGWISS VTRLFQTGYV
YHYAFTMIIG VFVLMTLWIN RA
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