Gene Daro_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0943 
Symbol 
ID3570257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1023243 
End bp1023860 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content55% 
IMG OID637679401 
Productribosomal RNA methyltransferase RrmJ/FtsJ 
Protein accessionYP_284169 
Protein GI71906582 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0293] 23S rRNA methylase 
TIGRFAM ID[TIGR00438] cell division protein FtsJ 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value0.521933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA CCAGAACCAG TAAAGCTTGG ATGCGTGAGC ATATTAACGA CACCTATGTT 
CAGCTCGCAA GGAAAGAAGG GTGGCGTTCC CGTGCTGCTT TCAAGCTGAT GGAAATGGAC
GACAAAGACA AGCTGCTCAA GCATGGCGAA GTCGTGGTCG ACCTTGGTGC CACCCCGGGG
GGGTGGTCAC AGGTGGCTGT CAAGCGGGTT GGCGACGGTG GCCTCGTGTT TGCCCTCGAT
CTGCTGGAAA TGGAGCCTAT TCACGGTGTT CACTTCATTC AGGGCGATTT TCGTGAAGAC
GAGGTGCTGC AGCAGTTGGA AGAACAGTTG GGTGAGCGTC GGGTGGGGCT TGTAATGTCC
GACATGGCCC CCAATATGTC AGGAGTTCCC CTCGTCGATC AGGCGCGCAT CATGCACTTG
GCTGAATTGG GGCTGGAGTT TTCCCGGGTA CACTTGAAAC CGGAGGGCGC TTTTCTGGTC
AAAGTCTTTC AGGGAACGGA TTACGAGACG TTTCTGAAGC AGATGCGCGA GACGTTCAAG
ACTGTCGCTG TGCGGAAACC GGATGCCTCA CGTGATCGTA GCCCTGAGCT TTATTTGCTC
GGACGCACAT TGCGTTGA
 
Protein sequence
MKRTRTSKAW MREHINDTYV QLARKEGWRS RAAFKLMEMD DKDKLLKHGE VVVDLGATPG 
GWSQVAVKRV GDGGLVFALD LLEMEPIHGV HFIQGDFRED EVLQQLEEQL GERRVGLVMS
DMAPNMSGVP LVDQARIMHL AELGLEFSRV HLKPEGAFLV KVFQGTDYET FLKQMRETFK
TVAVRKPDAS RDRSPELYLL GRTLR