| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0908 |
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| Symbol | |
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| ID | 3570065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 982748 |
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| End bp | 985603 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637679366 |
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| Product | inner-membrane translocator:ABC transporter related |
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| Protein accession | YP_284134 |
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| Protein GI | 71906547 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0412388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCTG AAATTTTTGC CCTGCTGGCG CAGGATGGCA TTACCAACGG TGCCATTTAC
GCCTTGCTGG CGCTGGCACT GGTCCTGGTG TTTGCCGTTA CCCGGATCAT CTTCATTCCG
CAGGGGGAAT TCCTCGCCTG GGGCGCATTG ACCATGGCGG CGCTCGAAGC TGGCGTTTTT
CCCGGCACCA TCTGGCTATT GATCGGCGCC GGTGTGCTGA CGCTGGGCGC CGATGTCATC
ACGGCTACAC CCGGGCGCCG CAGATTGGGA CAATCGGCCT TGTGGAACCT GGTCTATCCG
CTGGCCGTGG CAGGCCTGAC CTGGGTTTTG CCCCTGCAGG AACTGCCGCA TCTGGCCAAG
GCCTGCCTGG CCCTGGCCAT CGTCGTGCCG ATGGGACCGA TGCTCTATCG CATTGCCTTC
CAGCCGGTCG CTGAAGCACC GGTACTGGTT CTGCTGATCA TTTCGGTTGC CCTGCATCTG
CTGATGGTGG GCCTCGGGTT GCTGATCTTC GGTCCGGAAG GTTCGCGCAC GGCGCCGTTC
AGCGATGCGC AGATCGAGAT CGGCTCGTTG ATGATCGGCG GCCATACCAT CGTCGTGCTG
CTCGCTTCGC TGCTGCTGAT CGTCGGCCTC TACCTGTATT TCGACCGGAC GCTGGCGGGC
AAGGCGCTGC GCGCTACCGC GATCAACCGC AATGGCGCCC GCCTGATGGG CATTTCACCG
GCTTTGGCCG GTCGCCAGAC CTTCTTCTTC GCCGCCTTGA TCGGCACGCT GTCGGGCCTG
CTGGTCGCGC CGCTGACCAC CGTCTATTAC GACAGCGGCT TCCTGATTGG TCTGAAGGGA
TTCGTCGCCG CCATCATCGG CGGTCTGGCC AGTTATCCGC TGGCAGCCGC CGGCGCGATC
ATCGTCGGCC TGCTCGAATC CTTCTCTTCC TTCTGGGCCA GTGCCTTCAA GGATGTGCTG
GTGTTCACGC TGATCATTCC CGTGCTGATC TGGCTGTCCT GGAAAACCCA TCACGTTGAG
GAAGAGGAGA CGGCCCACGT CGTCAGCCTG TCGAATGGCA AAGGCTGGAT CAGTCCACGC
CTTGTGCTGG CGGTCTTTCT CGGTGCGATT GCCGTGGCCC CGCTGGTCCT GCCCGAGTTC
TACGTCACCT TGCTCAACTA CGTCGGTCTG TCGGCACTCG TCGCGCTTGG TCTGGTGTTG
CTGACCGGGG TGGGCGGCCT GACCTCCTTC GGGCAGGCGG CCTTCGTAGG TCTCGGTGCC
TACAGCACGG CCTGGCTGAC CACGACGGCT GATCTGCCCT CCTGGCTGGC CTTTACTGGT
GGGTCCCCGT GGGCGGCGTT GCTGCTCGGC CTGGTGATCA CGGCGACGGT AGCCATCATC
CTCGGTTCGG TGACGCTGAA GCTGTCCGGC CACTACCTGC CGCTCGGCAC CATGGCCTGG
GGCATCAGCC TGTTCTTCCT GTTCGGCAAC ATGGAGTTCC TCGGTGGTCA TGCCGGCCTG
TCCAATCTTC CGGCGATCAA GATCTTCGGC TTTGAGCTGC TCGATAACCG CTATTACTAC
TACCTGGTCT GGGCCTTCGT GCTGGCGGCC TTGTTCACCA CCAAGAATCT GCTCGATTCC
CGCGAAGGCC GCGCCATCCG GGCATTGAAG GGCGGCATGG TGATGGCCGA GGCGATGGGC
GTCGATACTT CCCGTGCCCG GATGGTGATC TTCGTCATCG CCGCGCTGCA TGCCTGTGCC
GCCGGTTGGC TTTATGCCCA CCTGCAGCGC TTTGTGAACC CGACGCCGTT CGGCCTGCAC
ATCGGCATCG AATACCTGTT CATGGCCGTG GTCGGGGGGG CCGGGCAGGT CTGGGGCGCG
CTGGTTGGTG CTGGCGTGAT CACGGTTCTC AAGCAGTGGC TGCAGGACAT TCTGCCCAAG
CTGTTCGGTT CGGCCGGGCA TTTCGAAACG ATCGTTTTCG GCTTGATGAT GATTGTTGTC
CTGCACCGGG CTCGTGAAGG TCTGTGGCCC TTGCTGGCCC GACTGGTGCC GGTACGCAGC
GAGCCGAAGG TGATCGATGC CACCGCCGAG CCGCTGCCGA AAAAGACCCA GCCGCCGCAT
GGCGAGGTGA TTCTCGAAGC CAAGGCGGTG ACCCGTAAGT TTGGCGGTCT GGTCGCCAAC
AACAACATGA GCCTGCACGT CGAGGCTGGC GAAATCCTGG CCCTGATCGG CCCGAACGGC
GCCGGTAAGA GCACGATGTT CAACCAGCTT TCCGGTGTCG ATACGCCGAC TTCCGGCGAA
GTGCTGTTCC GCGGCAAGCC GGTGGCCGGC CACAGTTCGC GGGAAATTGC GGCGCTCGGC
ATGAGCCGGA CTTTCCAGCA CGTCCGCCTG TTGCCGAATA TGAGCGTCCT GGAAAACGTC
GCCATCGGTG CCCACATGCG GGGCAGCAAG AGCGTCCTGC CGGCGGCCTG GCGTCTCGAT
CGCGAAGAAG AGGCACGCAT CCTGCGCGAA GCGGCTATTC AGGTCGAGCG GGTTGGTCTC
GGCGAATTCA TGCATCTCGA AGCCGGCAGC CTGGCCCTGG GGCAACAGCG CATTCTTGAA
ATCGCCCGCG CCCTGGCCTC GGATCCCTGC CTGCTGCTGC TCGATGAGCC GGCCGCCGGT
CTGCGTCTGA AGGAAAAACA GGCCCTGTCC GAACTGCTCA AGCGCCTGAA GTCGGAAGGC
ATGGCGGTGC TGATCGTCGA ACACGACATG GATTTCGTCA TGAGCCTGGT CGACCGCGTG
GTGGTCATGG AATTCGGCGA AAAGATCGCC GAGGGCCTGC CGGAAGAGAT CCAGAAAGAT
CCGGCCGTGC TCGAAGCTTA TTTGGGAGGC GTCTGA
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| Protein sequence | MDAEIFALLA QDGITNGAIY ALLALALVLV FAVTRIIFIP QGEFLAWGAL TMAALEAGVF
PGTIWLLIGA GVLTLGADVI TATPGRRRLG QSALWNLVYP LAVAGLTWVL PLQELPHLAK
ACLALAIVVP MGPMLYRIAF QPVAEAPVLV LLIISVALHL LMVGLGLLIF GPEGSRTAPF
SDAQIEIGSL MIGGHTIVVL LASLLLIVGL YLYFDRTLAG KALRATAINR NGARLMGISP
ALAGRQTFFF AALIGTLSGL LVAPLTTVYY DSGFLIGLKG FVAAIIGGLA SYPLAAAGAI
IVGLLESFSS FWASAFKDVL VFTLIIPVLI WLSWKTHHVE EEETAHVVSL SNGKGWISPR
LVLAVFLGAI AVAPLVLPEF YVTLLNYVGL SALVALGLVL LTGVGGLTSF GQAAFVGLGA
YSTAWLTTTA DLPSWLAFTG GSPWAALLLG LVITATVAII LGSVTLKLSG HYLPLGTMAW
GISLFFLFGN MEFLGGHAGL SNLPAIKIFG FELLDNRYYY YLVWAFVLAA LFTTKNLLDS
REGRAIRALK GGMVMAEAMG VDTSRARMVI FVIAALHACA AGWLYAHLQR FVNPTPFGLH
IGIEYLFMAV VGGAGQVWGA LVGAGVITVL KQWLQDILPK LFGSAGHFET IVFGLMMIVV
LHRAREGLWP LLARLVPVRS EPKVIDATAE PLPKKTQPPH GEVILEAKAV TRKFGGLVAN
NNMSLHVEAG EILALIGPNG AGKSTMFNQL SGVDTPTSGE VLFRGKPVAG HSSREIAALG
MSRTFQHVRL LPNMSVLENV AIGAHMRGSK SVLPAAWRLD REEEARILRE AAIQVERVGL
GEFMHLEAGS LALGQQRILE IARALASDPC LLLLDEPAAG LRLKEKQALS ELLKRLKSEG
MAVLIVEHDM DFVMSLVDRV VVMEFGEKIA EGLPEEIQKD PAVLEAYLGG V
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