| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0907 |
|---|
| Symbol | |
|---|
| ID | 3570064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 981608 |
|---|
| End bp | 982639 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637679365 |
|---|
| Product | 4-hydroxy-2-ketovalerate aldolase |
|---|
| Protein accession | YP_284133 |
|---|
| Protein GI | 71906546 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.0284448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGC GCGGCAAGAA CGTCACCGTC CACGACATGA CCCTGCGGGA TGGCATGCAT
CCCAAGCGTC ACCTGATGAC CCTCGACCAG ATGGTCAGCA TCGCCACCGG CCTCGACGAA
GCCGGTATTC CGCTGATCGA AGTCACCCAC GGCGATGGTC TCGGTGGTTC CTCGGTTAAC
TACGGCTTCC CGGCCCATAC CGATGAAGAG TATCTCGGCA CCGTCATCCC GAAGATGAAG
AATGCCAAGA TCTCGGCCTT GCTGTTGCCG GGTATCGGGA CTGTCGATCA CCTGAAGATG
GCACGTGACC TCGGCGTGCA CACCATTCGC GTCGCCACGC ACTGTACTGA GGCTGATGTC
TCCGAACAGC ACATCACCAT GGCCCGCAAA CTGGACATGG ACACCGTCGG CTTCCTGATG
ATGAGCCACA TGAACGGTGC CGAAGGTCTG GTCAAGCAAG CCAAGCTGAT GGAAGGCTAC
GGCGCCAACT GTATCTACGT CACCGACTCG GCCGGCCACC TGCTGCCGGA AGGCGTCAAG
GAACGTCTCG GTGCCGTCAG AAAAGCCCTG AAGCCGGAAA CCGAACTCGG TTTCCATGGC
CACCACAACC TGGCCATGGG CGTCGCCAAC TCGATCGCCG CCATCGAAGT CGGGGCCAAC
CGCATCGACG CAGCGGCGGC CGGCCTTGGC GCCGGCGCAG GCAACACGCC GATGGAAGTG
CTGATTGCCG TGTGCAGCCT GATGGGCATC GAGACTGGGG TTGATGTCGC CAAGATCACC
GACGTGGCCG AAGACCTGGT GGTGCCGATG ATGGACTTCC CGATCCGCAT TGACCGCGAT
GCACTGACGC TCGGCTATGC CGGCGTCTAT GGTTCCTTCC TGCTCTTTGC CAAGCGCGCT
TCCGCCAAGT ACGGCGTACC GGCCCGCGAC ATTCTGGTCG AGCTGGGCCG GCGCGGCATG
GTCGGTGGGC AGGAGGACAT GATCGAGGAT ACGGCCATCA CCATGGCGCG GGAACGTGGG
CTGAAGGTCT GA
|
|---|
| Protein sequence | MSLRGKNVTV HDMTLRDGMH PKRHLMTLDQ MVSIATGLDE AGIPLIEVTH GDGLGGSSVN
YGFPAHTDEE YLGTVIPKMK NAKISALLLP GIGTVDHLKM ARDLGVHTIR VATHCTEADV
SEQHITMARK LDMDTVGFLM MSHMNGAEGL VKQAKLMEGY GANCIYVTDS AGHLLPEGVK
ERLGAVRKAL KPETELGFHG HHNLAMGVAN SIAAIEVGAN RIDAAAAGLG AGAGNTPMEV
LIAVCSLMGI ETGVDVAKIT DVAEDLVVPM MDFPIRIDRD ALTLGYAGVY GSFLLFAKRA
SAKYGVPARD ILVELGRRGM VGGQEDMIED TAITMARERG LKV
|
|---|
| |