| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0882 |
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| Symbol | |
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| ID | 3569945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 955624 |
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| End bp | 956238 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679340 |
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| Product | general secretion pathway protein H |
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| Protein accession | YP_284108 |
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| Protein GI | 71906521 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 0.00289529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.110934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAG TTATAAGATT CGCTGTCGAT AATATAAATA TGAATAAATC ATCTGCTTTT
AACAGACAAG GCCAGCGCGG ATTCACGTTG ATCGAACTGA TCGTCGTGAT CATCATCCTT
GGCATTCTGG CTGCGGTTGC TCTGCCGCGT TTTGTCAATT TGCAACGCGA TGCCCGCATT
GCCAAGCTGG AAGCGGCACG CGGCAGCGTG CTCGCGGCAT CGGCCTTGTC GCATGCGACG
ATGCTGGCCC GGGCCGGCGT TGCGGATACA GCGGCTTGTC CTGGTGGTGG TGGCACGGCG
ACCAATGTCG TTTCCGGGGC TGGCACGGTG TGTACCGAGA GCGGCATTGT TAACATGACC
AACGCCTATC CGGCGGTCAC GGCGATCGGA ACTACCGCCG GTATTCTGTC GATGGCCGGC
CTGACCGGTG TGTTCAATCC GACAGCGGCA CAATTGCAGA CCGAGGGCTA TACCTACGGT
GGTGCTGCCG GCGGCACGGC CACTTTCGGT GTGGTGGGGG CGACAGCTGC CGGAACCTGT
TTGTTTACTT ACGCGCCTGC CGCCGCACCT AATGCAGCGC CGACGATCAG TGCCCTGACC
ACGACCGGAT GCTAA
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| Protein sequence | MSKVIRFAVD NINMNKSSAF NRQGQRGFTL IELIVVIIIL GILAAVALPR FVNLQRDARI
AKLEAARGSV LAASALSHAT MLARAGVADT AACPGGGGTA TNVVSGAGTV CTESGIVNMT
NAYPAVTAIG TTAGILSMAG LTGVFNPTAA QLQTEGYTYG GAAGGTATFG VVGATAAGTC
LFTYAPAAAP NAAPTISALT TTGC
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