Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0870 |
Symbol | |
ID | 3569933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 942541 |
End bp | 943740 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637679328 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_284096 |
Protein GI | 71906509 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00318108 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCAAT ATAACTTCCC AGACGCCAAG GGCCATTTCG GCCCCTACGG TGGCGTCTTC GTGGCCGAGA CGCTGTTTGG CGCGCTCGAT GAATTGAAGG AAGCCTACGC GGCTGCGCAG GCTGATCCGG CCTTCCGCGC CGAATACGAA TACGAGCTCA AACATTTTGT CGGACGCCCG TCGCCGATCT ACCACGCCAA GCGCTGGTCC GAAATGCTCG GCGGCGCCCA GATCTACCTA AAGCGCGAAG ACCTTAACCA CACCGGTGCC CACAAGGTGA ATAACTGCAT CGGCCAGGCC ATGCTCGCCA AGCGCATGGG CAAGCCGCGC GTGATCGCCG AAACGGGCGC CGGCCAGCAC GGCGTTGCGA CGGCCACCGT CGCCGCCCGC TACGGCATGG AGTGCGTGGT TTATATGGGT AGCGAGGACG TCAAACGGCA GGCGGCCAAC GTCTATCGCA TGAAATTGCT CGGCGCCACG GTCGTGCCGG TCGAGTCTGG CTCTAAGACA CTCAAGGACG CGCTCAACGA AGCGATGCGC GACTGGGTCA CCAACATCCA CAACACCTTC TACATCATCG GCACGGTGGC AGGCCCGCAC CCGTACCCGA TGCTAGTGCG CGATTTTCAG AAGATCATTG GCGAAGAATG TCTGGTCCAG ATGCCGGAAA TGACCGGCCG TCAGCCGGAT GCCGTTATTG CCTGCGTCGG CGGTGGTTCC AACGCGATGG GTATCTTCTA CCCGTACATA AATGTCGAGG GCGTTCGCCT GATTGGCGTC GAAGCCGCCG GTGATGGGAT GGAAACGGGT CGTCACTCTG CCTCGCTGAC TGCTGGTGTA CCCGGCGTGC TGCACGGAAA CCGCACTTAC CTGCTGCAGG ATGAAGATGG CCAGATTATT GAGACGCATT CGGTGTCGGC TGGTCTGGAT TACCCGGGGG TTGGCCCGGA ACACGCCTGG CTGAAGGACT TGGGTCGCGC TGAATACCAG CCTGTTACCG ACAGCGAAGC GCTGGCCGCC TTCCATACCC TGTGCCGTAT TGAGGGGATC ATCCCTGCGC TCGAATCCAG CCACGCGCTG GCCTACGCCG CCAAGCTGGC ACCGACGCTG GCCAAGGACA AGATTCTGCT GGTCAACCTC TCCGGTCGGG GTGACAAGGA TATGCATACC GTGGCCGAAA AATCCGGGAT CGTCTTCTGA
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Protein sequence | MSQYNFPDAK GHFGPYGGVF VAETLFGALD ELKEAYAAAQ ADPAFRAEYE YELKHFVGRP SPIYHAKRWS EMLGGAQIYL KREDLNHTGA HKVNNCIGQA MLAKRMGKPR VIAETGAGQH GVATATVAAR YGMECVVYMG SEDVKRQAAN VYRMKLLGAT VVPVESGSKT LKDALNEAMR DWVTNIHNTF YIIGTVAGPH PYPMLVRDFQ KIIGEECLVQ MPEMTGRQPD AVIACVGGGS NAMGIFYPYI NVEGVRLIGV EAAGDGMETG RHSASLTAGV PGVLHGNRTY LLQDEDGQII ETHSVSAGLD YPGVGPEHAW LKDLGRAEYQ PVTDSEALAA FHTLCRIEGI IPALESSHAL AYAAKLAPTL AKDKILLVNL SGRGDKDMHT VAEKSGIVF
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