| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0868 |
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| Symbol | truA |
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| ID | 3569931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 941143 |
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| End bp | 941931 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679326 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_284094 |
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| Protein GI | 71906507 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.00469579 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00315924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGAGTTG CGTTGGGGAT TGAATACTGC GGTACCGGGT TCCATGGCTG GCAGAGTCAG
GCCGGCGGTG GGACGGTGCA GGATGCATTG GAAGCGGCGT TGGGCGAAGT TGCCGGTGTG
CCGGTTGGTG TGCTCTGCGC GGGGAGAACC GATGCCGGGG TCCATGCAAC CCATCAGGTT
GCCCATTTCG ATGCGCCGGT TGATCGTCCG CTGACCGCAT GGGTGCGCGG GGTTAATTCG
CATTTGCCGG AAGGCGTGGC CGTGCGTTGG GCGCAGCCGG TGGCAGAAGA TTTTCACGCC
CGCTTCAGTG CCCGAGGCCG GCGCTATCGT TATCTGCTGC TTAATCGTCC GCAGCGCCCT
GGATTGTGGC AAGGACGGGT GGGCTGGTTT CACTGGCCGC TGGAGCTGGA AGCGATGCAG
GAGGCCTGTC TTCGGCTGCT CGGCGAGCAT GATTTTTCTG CTTTCAGGGC GGCAAATTGT
CAGGCCAAGT CACCGGTCAA GCACATGTCG CGGGCTGAGG TGCGCCAGTG CGGCAACATG
TTTGTTTTTG ATTTCGAGGC CAGTGCCTTC CTGCATCACA TGGTGCGCAA TCTGGTCGGT
ACGCTGGTCT ATATTGGCAA GGGTACGCAG CAGCCAGACT GGATCGAAGC GCTTCTGCAG
ACAAAGGATC GTAAACTGGC AGCGCCTACC TTTTCGCCGG ATGGTCTGTA TTTCCGTGGG
CCGGTTTACG AACCGCACTG GGGATTGCCT GATCCGAATG ACGATTTCCT CGATGGAATG
TTGAAATGA
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| Protein sequence | MRVALGIEYC GTGFHGWQSQ AGGGTVQDAL EAALGEVAGV PVGVLCAGRT DAGVHATHQV
AHFDAPVDRP LTAWVRGVNS HLPEGVAVRW AQPVAEDFHA RFSARGRRYR YLLLNRPQRP
GLWQGRVGWF HWPLELEAMQ EACLRLLGEH DFSAFRAANC QAKSPVKHMS RAEVRQCGNM
FVFDFEASAF LHHMVRNLVG TLVYIGKGTQ QPDWIEALLQ TKDRKLAAPT FSPDGLYFRG
PVYEPHWGLP DPNDDFLDGM LK
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