| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0851 |
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| Symbol | rumA |
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| ID | 3569837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 923440 |
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| End bp | 924738 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637679308 |
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| Product | 23S rRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_284077 |
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| Protein GI | 71906490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 0.0954916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000117621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCGATCG GGAAAATCGA ATCGCTGGAC CACGAAGCAC GGGGCATCAC TCGTCAAGAG
GGCAAAGCCA TATTTGTCGA CGGCGCCCTG CCTGGAGAAA CCGTCGAATA CGCCAGCTTT
CGGAGGAAGT CGAAATTCGA GCTGGCGCAT CTGGTTCATG TGATTAAGCC GTCGACTGCG
CGGGTCGAGC CGTGCTGCCC GCATTTTGGG GTCTGCGGCG GTTGCGCCAT GCAGCACATG
GAGCCTTCTG CCCAGGTCGC CGCCAAGCAG CGCGTGCTTG AAGATAGTCT CTGGCACATT
GGCCGCATTC GCCCGGAAAC GATGCTGCCG CCGATTCAAG GGGAACCGTG GGGGTATCGA
CATCGCGCCC GCCTTGCTGT CCGCCGGGTG TCGAAAAGCG GCGGTATGCT GATTGGTTTT
CATGAGTGGC GCAGTAGCTA CATTGCAGAT ATTCGAAGTT GCGCCATTTT GCCGCCGCAT
GTCTCGGCGT TGTTGATGCC GATGCGCGAG CTGTTTGCGG CCCTGTCGAT CGCCGAGCGC
ATACGTGAGG TCGACGTGGC GGTTGGCGAG CACTGCACGG CGCTGCTGTT ACGTATTCTC
GATCCGCTGA CCCCGGCCGA TGAGCGCTTG TTGTGCGATT TTGTCGACCG GAACGATGTC
GTTTTTTACT TGCAGCCCAA AGGGCCTGAT ACGGCCTTCC GGTTTTATCC GAGCGGTGGG
CCGCGCCTTT CGTACACCCT TCCCGAGTTC GGCCTCGAGT TTGATTTCAA GCCGACCGAT
TTCACGCAGG TCAATCACGC GGTGAATCGG GTGCTGGTTC GCCGGGCTTT GCGCCTACTC
GATCCGCAGC CAAGCGAGCG GATTGCCGAC ATGTTTTGTG GCTTGGGGAA TTTTACCTTG
CCGATCGCCC GGTCCGGAGC GACAGTAATC GGCGTCGAAG GCAGTGCCGC CCTGGTTCGG
CGCGGGCGGG AGAGTGCGGC GGCGAATGGG TTGGCCGATC ACGTCGAGTT CGGCGTCGCC
AACCTGTTCG AATGCACCGA ACAATCGCTG GCCGCGCTTG GTCGTTTCGA CAAAATGCTG
ATCGATCCGC CGCGTGAGGG GGCTGTCGAA CTGGTCCGGG CAATTGGCAA GGATGCGCCG
AAGCGCATTG TCTACGTTTC CTGCAATCCG GGAACCCTGG CCCGTGATGC GGCAGTGTTG
GTGACGGAGA AGGGGTATCG CTTCGTCTCG GCTGGTGCGG TCAATATGTT TCCCCATACC
GCGCATGTTG AATCGATTGC CGTTTTCGAA CTGCCATGA
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| Protein sequence | MPIGKIESLD HEARGITRQE GKAIFVDGAL PGETVEYASF RRKSKFELAH LVHVIKPSTA
RVEPCCPHFG VCGGCAMQHM EPSAQVAAKQ RVLEDSLWHI GRIRPETMLP PIQGEPWGYR
HRARLAVRRV SKSGGMLIGF HEWRSSYIAD IRSCAILPPH VSALLMPMRE LFAALSIAER
IREVDVAVGE HCTALLLRIL DPLTPADERL LCDFVDRNDV VFYLQPKGPD TAFRFYPSGG
PRLSYTLPEF GLEFDFKPTD FTQVNHAVNR VLVRRALRLL DPQPSERIAD MFCGLGNFTL
PIARSGATVI GVEGSAALVR RGRESAAANG LADHVEFGVA NLFECTEQSL AALGRFDKML
IDPPREGAVE LVRAIGKDAP KRIVYVSCNP GTLARDAAVL VTEKGYRFVS AGAVNMFPHT
AHVESIAVFE LP
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